Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=3725
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=3750", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=3700", "results": [ { "id": 3710, "identifier": "GO:0050884", "identifier_type": "str", "name": "neuromuscular process controlling posture", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0050884", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 3711, "identifier": "GO:0004551", "identifier_type": "str", "name": "nucleotide diphosphatase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004551", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 3712, "identifier": "GO:0034362", "identifier_type": "str", "name": "low-density lipoprotein particle", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0034362", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 3713, "identifier": "2098", "identifier_type": "int", "name": "ESD", "properties": { "url": "http://identifiers.org/ncbigene/2098", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "esterase D" }, "metanode": "Gene" }, { "id": 3714, "identifier": "PC7_4532", "identifier_type": "str", "name": "Hydroxycarboxylic acid-binding receptors", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 3715, "identifier": "PC7_8312", "identifier_type": "str", "name": "Trafficking of GluR2-containing AMPA receptors", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 3716, "identifier": "222255", "identifier_type": "int", "name": "ATXN7L1", "properties": { "url": "http://identifiers.org/ncbigene/222255", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "ataxin 7-like 1" }, "metanode": "Gene" }, { "id": 3717, "identifier": "C0019917", "identifier_type": "str", "name": "Hordeolum", "properties": { "url": "http://identifiers.org/umls/C0019917", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 3718, "identifier": "4695", "identifier_type": "int", "name": "NDUFA2", "properties": { "url": "http://identifiers.org/ncbigene/4695", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa" }, "metanode": "Gene" }, { "id": 3719, "identifier": "56125", "identifier_type": "int", "name": "PCDHB11", "properties": { "url": "http://identifiers.org/ncbigene/56125", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "protocadherin beta 11" }, "metanode": "Gene" }, { "id": 3720, "identifier": "112399", "identifier_type": "int", "name": "EGLN3", "properties": { "url": "http://identifiers.org/ncbigene/112399", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "egl-9 family hypoxia-inducible factor 3" }, "metanode": "Gene" }, { "id": 3721, "identifier": "115557", "identifier_type": "int", "name": "ARHGEF25", "properties": { "url": "http://identifiers.org/ncbigene/115557", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "Rho guanine nucleotide exchange factor (GEF) 25" }, "metanode": "Gene" }, { "id": 3722, "identifier": "UBERON:0001492", "identifier_type": "str", "name": "radial nerve", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0001492", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D011826" }, "metanode": "Anatomy" }, { "id": 3723, "identifier": "7148", "identifier_type": "int", "name": "TNXB", "properties": { "url": "http://identifiers.org/ncbigene/7148", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "tenascin XB" }, "metanode": "Gene" }, { "id": 3724, "identifier": "GO:0009794", "identifier_type": "str", "name": "regulation of mitotic cell cycle, embryonic", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009794", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 3725, "identifier": "GO:0033014", "identifier_type": "str", "name": "tetrapyrrole biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033014", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 3726, "identifier": "GO:0072592", "identifier_type": "str", "name": "oxygen metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0072592", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 3727, "identifier": "GO:0005026", "identifier_type": "str", "name": "transforming growth factor beta receptor activity, type II", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005026", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 3728, "identifier": "C1879328", "identifier_type": "str", "name": "Blindness, both eyes", "properties": { "url": "http://identifiers.org/umls/C1879328", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 3729, "identifier": "GO:0015174", "identifier_type": "str", "name": "basic amino acid transmembrane transporter activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015174", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 3730, "identifier": "26683", "identifier_type": "int", "name": "OR4F3", "properties": { "url": "http://identifiers.org/ncbigene/26683", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "olfactory receptor, family 4, subfamily F, member 3" }, "metanode": "Gene" }, { "id": 3731, "identifier": "2678", "identifier_type": "int", "name": "GGT1", "properties": { "url": "http://identifiers.org/ncbigene/2678", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "gamma-glutamyltransferase 1" }, "metanode": "Gene" }, { "id": 3732, "identifier": "11169", "identifier_type": "int", "name": "WDHD1", "properties": { "url": "http://identifiers.org/ncbigene/11169", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "WD repeat and HMG-box DNA binding protein 1" }, "metanode": "Gene" }, { "id": 3733, "identifier": "DB00951", "identifier_type": "str", "name": "Isoniazid", "properties": { "url": "http://www.drugbank.ca/drugs/DB00951", "inchi": "InChI=1S/C6H7N3O/c7-9-6(10)5-1-3-8-4-2-5/h1-4H,7H2,(H,9,10)", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=QRXWMOHMRWLFEY-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 3734, "identifier": "DB00260", "identifier_type": "str", "name": "Cycloserine", "properties": { "url": "http://www.drugbank.ca/drugs/DB00260", "inchi": "InChI=1S/C3H6N2O2/c4-2-1-7-5-3(2)6/h2H,1,4H2,(H,5,6)/t2-/m1/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=DYDCUQKUCUHJBH-UWTATZPHSA-N" }, "metanode": "Compound" } ] }