Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=37850

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=37875",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=37825",
    "results": [
        {
            "id": 37846,
            "identifier": "2593",
            "identifier_type": "int",
            "name": "GAMT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2593",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "guanidinoacetate N-methyltransferase"
            },
            "metanode": "Gene"
        },
        {
            "id": 37847,
            "identifier": "C0343494",
            "identifier_type": "str",
            "name": "Risus sardonicus",
            "properties": {
                "url": "http://identifiers.org/umls/C0343494",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 37848,
            "identifier": "DB01111",
            "identifier_type": "str",
            "name": "Colistimethate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01111",
                "inchi": "InChI=1S/C58H110N16O28S5/c1-9-35(6)12-10-11-13-46(77)65-38(14-20-59-28-103(88,89)90)53(82)74-48(37(8)76)58(87)70-41(17-23-62-31-106(97,98)99)50(79)68-43-19-25-64-57(86)47(36(7)75)73-54(83)42(18-24-63-32-107(100,101)102)67-49(78)39(15-21-60-29-104(91,92)93)69-55(84)44(26-33(2)3)72-56(85)45(27-34(4)5)71-52(81)40(66-51(43)80)16-22-61-30-105(94,95)96/h33-45,47-48,59-63,75-76H,9-32H2,1-8H3,(H,64,86)(H,65,77)(H,66,80)(H,67,78)(H,68,79)(H,69,84)(H,70,87)(H,71,81)(H,72,85)(H,73,83)(H,74,82)(H,88,89,90)(H,91,92,93)(H,94,95,96)(H,97,98,99)(H,100,101,102)/p-5",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BSSIRFLGSWHWDE-UHFFFAOYSA-I"
            },
            "metanode": "Compound"
        },
        {
            "id": 37849,
            "identifier": "7750",
            "identifier_type": "int",
            "name": "ZMYM2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7750",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "zinc finger, MYM-type 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 37850,
            "identifier": "PC7_10508",
            "identifier_type": "str",
            "name": "alpha-linolenic (omega3) and linoleic (omega6) acid metabolism",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 37851,
            "identifier": "5190",
            "identifier_type": "int",
            "name": "PEX6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5190",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "peroxisomal biogenesis factor 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 37852,
            "identifier": "GO:0006312",
            "identifier_type": "str",
            "name": "mitotic recombination",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006312",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 37853,
            "identifier": "55084",
            "identifier_type": "int",
            "name": "SOBP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55084",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "sine oculis binding protein homolog (Drosophila)"
            },
            "metanode": "Gene"
        },
        {
            "id": 37854,
            "identifier": "GO:0033604",
            "identifier_type": "str",
            "name": "negative regulation of catecholamine secretion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0033604",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 37855,
            "identifier": "GO:0071047",
            "identifier_type": "str",
            "name": "polyadenylation-dependent mRNA catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071047",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 37856,
            "identifier": "GO:0015250",
            "identifier_type": "str",
            "name": "water channel activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015250",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 37857,
            "identifier": "7643",
            "identifier_type": "int",
            "name": "ZNF90",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7643",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 90"
            },
            "metanode": "Gene"
        },
        {
            "id": 37858,
            "identifier": "C0015786",
            "identifier_type": "str",
            "name": "Female sexual arousal disorder",
            "properties": {
                "url": "http://identifiers.org/umls/C0015786",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 37859,
            "identifier": "GO:0032452",
            "identifier_type": "str",
            "name": "histone demethylase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032452",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 37860,
            "identifier": "442247",
            "identifier_type": "int",
            "name": "RFPL4B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/442247",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "ret finger protein-like 4B"
            },
            "metanode": "Gene"
        },
        {
            "id": 37861,
            "identifier": "GO:0004298",
            "identifier_type": "str",
            "name": "threonine-type endopeptidase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004298",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 37862,
            "identifier": "619373",
            "identifier_type": "int",
            "name": "MBOAT4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/619373",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "membrane bound O-acyltransferase domain containing 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 37863,
            "identifier": "79571",
            "identifier_type": "int",
            "name": "GCC1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79571",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "GRIP and coiled-coil domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 37864,
            "identifier": "GO:0072334",
            "identifier_type": "str",
            "name": "UDP-galactose transmembrane transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072334",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 37865,
            "identifier": "GO:0036289",
            "identifier_type": "str",
            "name": "peptidyl-serine autophosphorylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0036289",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 37866,
            "identifier": "50614",
            "identifier_type": "int",
            "name": "GALNT9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/50614",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "polypeptide N-acetylgalactosaminyltransferase 9"
            },
            "metanode": "Gene"
        },
        {
            "id": 37867,
            "identifier": "GO:0071347",
            "identifier_type": "str",
            "name": "cellular response to interleukin-1",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071347",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 37868,
            "identifier": "PC7_5559",
            "identifier_type": "str",
            "name": "MyD88 dependent cascade initiated on endosome",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 37869,
            "identifier": "728637",
            "identifier_type": "int",
            "name": "MEIKIN",
            "properties": {
                "url": "http://identifiers.org/ncbigene/728637",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "meiotic kinetochore factor"
            },
            "metanode": "Gene"
        },
        {
            "id": 37870,
            "identifier": "C1260922",
            "identifier_type": "str",
            "name": "Respiration abnormal",
            "properties": {
                "url": "http://identifiers.org/umls/C1260922",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}