Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=38275
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=38300", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=38250", "results": [ { "id": 38272, "identifier": "64333", "identifier_type": "int", "name": "ARHGAP9", "properties": { "url": "http://identifiers.org/ncbigene/64333", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "Rho GTPase activating protein 9" }, "metanode": "Gene" }, { "id": 38273, "identifier": "225689", "identifier_type": "int", "name": "MAPK15", "properties": { "url": "http://identifiers.org/ncbigene/225689", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "mitogen-activated protein kinase 15" }, "metanode": "Gene" }, { "id": 38274, "identifier": "GO:0002876", "identifier_type": "str", "name": "positive regulation of chronic inflammatory response to antigenic stimulus", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002876", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 38275, "identifier": "GO:0016972", "identifier_type": "str", "name": "thiol oxidase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016972", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 38276, "identifier": "GO:0045879", "identifier_type": "str", "name": "negative regulation of smoothened signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045879", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 38277, "identifier": "100271849", "identifier_type": "int", "name": "MEF2B", "properties": { "url": "http://identifiers.org/ncbigene/100271849", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "myocyte enhancer factor 2B" }, "metanode": "Gene" }, { "id": 38278, "identifier": "PC7_5871", "identifier_type": "str", "name": "Nef and signal transduction", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 38279, "identifier": "8887", "identifier_type": "int", "name": "TAX1BP1", "properties": { "url": "http://identifiers.org/ncbigene/8887", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "Tax1 (human T-cell leukemia virus type I) binding protein 1" }, "metanode": "Gene" }, { "id": 38280, "identifier": "GO:0038171", "identifier_type": "str", "name": "cannabinoid signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0038171", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 38281, "identifier": "81572", "identifier_type": "int", "name": "PDRG1", "properties": { "url": "http://identifiers.org/ncbigene/81572", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "p53 and DNA-damage regulated 1" }, "metanode": "Gene" }, { "id": 38282, "identifier": "GO:0032497", "identifier_type": "str", "name": "detection of lipopolysaccharide", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032497", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 38283, "identifier": "GO:0044179", "identifier_type": "str", "name": "hemolysis in other organism", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0044179", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 38284, "identifier": "2705", "identifier_type": "int", "name": "GJB1", "properties": { "url": "http://identifiers.org/ncbigene/2705", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "gap junction protein, beta 1, 32kDa" }, "metanode": "Gene" }, { "id": 38285, "identifier": "GO:2000573", "identifier_type": "str", "name": "positive regulation of DNA biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000573", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 38286, "identifier": "79929", "identifier_type": "int", "name": "MAP6D1", "properties": { "url": "http://identifiers.org/ncbigene/79929", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "MAP6 domain containing 1" }, "metanode": "Gene" }, { "id": 38287, "identifier": "GO:0071733", "identifier_type": "str", "name": "transcriptional activation by promoter-enhancer looping", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071733", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 38288, "identifier": "5174", "identifier_type": "int", "name": "PDZK1", "properties": { "url": "http://identifiers.org/ncbigene/5174", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "PDZ domain containing 1" }, "metanode": "Gene" }, { "id": 38289, "identifier": "55196", "identifier_type": "int", "name": "KIAA1551", "properties": { "url": "http://identifiers.org/ncbigene/55196", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "KIAA1551" }, "metanode": "Gene" }, { "id": 38290, "identifier": "PC7_7680", "identifier_type": "str", "name": "Stimulation of the cell death response by PAK-2p34", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 38291, "identifier": "GO:0002021", "identifier_type": "str", "name": "response to dietary excess", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002021", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 38292, "identifier": "729993", "identifier_type": "int", "name": "SHISA9", "properties": { "url": "http://identifiers.org/ncbigene/729993", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "shisa family member 9" }, "metanode": "Gene" }, { "id": 38293, "identifier": "GO:0000178", "identifier_type": "str", "name": "exosome (RNase complex)", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0000178", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 38294, "identifier": "23269", "identifier_type": "int", "name": "MGA", "properties": { "url": "http://identifiers.org/ncbigene/23269", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "MGA, MAX dimerization protein" }, "metanode": "Gene" }, { "id": 38295, "identifier": "GO:1904659", "identifier_type": "str", "name": "glucose transmembrane transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1904659", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 38296, "identifier": "GO:1990089", "identifier_type": "str", "name": "response to nerve growth factor", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1990089", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }