Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=38450

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=38475",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=38425",
    "results": [
        {
            "id": 38447,
            "identifier": "GO:0038181",
            "identifier_type": "str",
            "name": "bile acid receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0038181",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 38448,
            "identifier": "6490",
            "identifier_type": "int",
            "name": "PMEL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6490",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "premelanosome protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 38449,
            "identifier": "1401",
            "identifier_type": "int",
            "name": "CRP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1401",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "C-reactive protein, pentraxin-related"
            },
            "metanode": "Gene"
        },
        {
            "id": 38450,
            "identifier": "9908",
            "identifier_type": "int",
            "name": "G3BP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9908",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "GTPase activating protein (SH3 domain) binding protein 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 38451,
            "identifier": "C0745761",
            "identifier_type": "str",
            "name": "Liver nodule",
            "properties": {
                "url": "http://identifiers.org/umls/C0745761",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 38452,
            "identifier": "GO:1900363",
            "identifier_type": "str",
            "name": "regulation of mRNA polyadenylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1900363",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38453,
            "identifier": "112840",
            "identifier_type": "int",
            "name": "WDR89",
            "properties": {
                "url": "http://identifiers.org/ncbigene/112840",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "WD repeat domain 89"
            },
            "metanode": "Gene"
        },
        {
            "id": 38454,
            "identifier": "GO:0052509",
            "identifier_type": "str",
            "name": "positive regulation by symbiont of host defense response",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052509",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38455,
            "identifier": "105373297",
            "identifier_type": "int",
            "name": "LOC105373297",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105373297",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "endogenous retrovirus group FC1 Env polyprotein"
            },
            "metanode": "Gene"
        },
        {
            "id": 38456,
            "identifier": "23043",
            "identifier_type": "int",
            "name": "TNIK",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23043",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "TRAF2 and NCK interacting kinase"
            },
            "metanode": "Gene"
        },
        {
            "id": 38457,
            "identifier": "GO:0030689",
            "identifier_type": "str",
            "name": "Noc complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030689",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 38458,
            "identifier": "2099",
            "identifier_type": "int",
            "name": "ESR1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2099",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "estrogen receptor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 38459,
            "identifier": "GO:0071224",
            "identifier_type": "str",
            "name": "cellular response to peptidoglycan",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071224",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38460,
            "identifier": "4680",
            "identifier_type": "int",
            "name": "CEACAM6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4680",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)"
            },
            "metanode": "Gene"
        },
        {
            "id": 38461,
            "identifier": "C1096529",
            "identifier_type": "str",
            "name": "Carotid pulse",
            "properties": {
                "url": "http://identifiers.org/umls/C1096529",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 38462,
            "identifier": "GO:0040036",
            "identifier_type": "str",
            "name": "regulation of fibroblast growth factor receptor signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0040036",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38463,
            "identifier": "85002",
            "identifier_type": "int",
            "name": "FAM86B1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/85002",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "family with sequence similarity 86, member B1"
            },
            "metanode": "Gene"
        },
        {
            "id": 38464,
            "identifier": "DB00876",
            "identifier_type": "str",
            "name": "Eprosartan",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00876",
                "inchi": "InChI=1S/C23H24N2O4S/c1-2-3-6-21-24-14-19(12-18(23(28)29)13-20-5-4-11-30-20)25(21)15-16-7-9-17(10-8-16)22(26)27/h4-5,7-12,14H,2-3,6,13,15H2,1H3,(H,26,27)(H,28,29)/b18-12+",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=OROAFUQRIXKEMV-LDADJPATSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 38465,
            "identifier": "C0020757",
            "identifier_type": "str",
            "name": "Ichthyosis",
            "properties": {
                "url": "http://identifiers.org/umls/C0020757",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 38466,
            "identifier": "GO:0051346",
            "identifier_type": "str",
            "name": "negative regulation of hydrolase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051346",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38467,
            "identifier": "146712",
            "identifier_type": "int",
            "name": "B3GNTL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/146712",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 38468,
            "identifier": "57171",
            "identifier_type": "int",
            "name": "DOLPP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57171",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "dolichyldiphosphatase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 38469,
            "identifier": "GO:0090611",
            "identifier_type": "str",
            "name": "ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090611",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38470,
            "identifier": "388662",
            "identifier_type": "int",
            "name": "SLC6A17",
            "properties": {
                "url": "http://identifiers.org/ncbigene/388662",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "solute carrier family 6 (neutral amino acid transporter), member 17"
            },
            "metanode": "Gene"
        },
        {
            "id": 38471,
            "identifier": "GO:0034703",
            "identifier_type": "str",
            "name": "cation channel complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034703",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        }
    ]
}