Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=38875

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=38900",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=38850",
    "results": [
        {
            "id": 38874,
            "identifier": "C0743323",
            "identifier_type": "str",
            "name": "Acute dyspnea",
            "properties": {
                "url": "http://identifiers.org/umls/C0743323",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 38875,
            "identifier": "126306",
            "identifier_type": "int",
            "name": "JSRP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/126306",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "junctional sarcoplasmic reticulum protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 38876,
            "identifier": "1513",
            "identifier_type": "int",
            "name": "CTSK",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1513",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "cathepsin K"
            },
            "metanode": "Gene"
        },
        {
            "id": 38877,
            "identifier": "GO:0021622",
            "identifier_type": "str",
            "name": "oculomotor nerve morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021622",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38878,
            "identifier": "DB00301",
            "identifier_type": "str",
            "name": "Flucloxacillin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00301",
                "inchi": "InChI=1S/C19H17ClFN3O5S/c1-7-10(12(23-29-7)11-8(20)5-4-6-9(11)21)15(25)22-13-16(26)24-14(18(27)28)19(2,3)30-17(13)24/h4-6,13-14,17H,1-3H3,(H,22,25)(H,27,28)/t13-,14+,17-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=UIOFUWFRIANQPC-JKIFEVAISA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 38879,
            "identifier": "GO:0008284",
            "identifier_type": "str",
            "name": "positive regulation of cell proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008284",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38880,
            "identifier": "122616",
            "identifier_type": "int",
            "name": "C14orf79",
            "properties": {
                "url": "http://identifiers.org/ncbigene/122616",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "chromosome 14 open reading frame 79"
            },
            "metanode": "Gene"
        },
        {
            "id": 38881,
            "identifier": "GO:0048024",
            "identifier_type": "str",
            "name": "regulation of mRNA splicing, via spliceosome",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048024",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38882,
            "identifier": "GO:1903293",
            "identifier_type": "str",
            "name": "phosphatase complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903293",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 38883,
            "identifier": "3854",
            "identifier_type": "int",
            "name": "KRT6B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3854",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "keratin 6B, type II"
            },
            "metanode": "Gene"
        },
        {
            "id": 38884,
            "identifier": "GO:0071043",
            "identifier_type": "str",
            "name": "CUT metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071043",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38885,
            "identifier": "DB00900",
            "identifier_type": "str",
            "name": "Didanosine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00900",
                "inchi": "InChI=1S/C10H12N4O3/c15-3-6-1-2-7(17-6)14-5-13-8-9(14)11-4-12-10(8)16/h4-7,15H,1-3H2,(H,11,12,16)/t6-,7+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BXZVVICBKDXVGW-NKWVEPMBSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 38886,
            "identifier": "DB00289",
            "identifier_type": "str",
            "name": "Atomoxetine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00289",
                "inchi": "InChI=1S/C17H21NO/c1-14-8-6-7-11-16(14)19-17(12-13-18-2)15-9-4-3-5-10-15/h3-11,17-18H,12-13H2,1-2H3/t17-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=VHGCDTVCOLNTBX-QGZVFWFLSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 38887,
            "identifier": "GO:0019083",
            "identifier_type": "str",
            "name": "viral transcription",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0019083",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38888,
            "identifier": "10974",
            "identifier_type": "int",
            "name": "ADIRF",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10974",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "adipogenesis regulatory factor"
            },
            "metanode": "Gene"
        },
        {
            "id": 38889,
            "identifier": "GO:0005779",
            "identifier_type": "str",
            "name": "integral component of peroxisomal membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005779",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 38890,
            "identifier": "GO:0045650",
            "identifier_type": "str",
            "name": "negative regulation of macrophage differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045650",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38891,
            "identifier": "GO:0002503",
            "identifier_type": "str",
            "name": "peptide antigen assembly with MHC class II protein complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002503",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38892,
            "identifier": "GO:0031396",
            "identifier_type": "str",
            "name": "regulation of protein ubiquitination",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0031396",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38893,
            "identifier": "105374860",
            "identifier_type": "int",
            "name": "LOC105374860",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105374860",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "uncharacterized LOC105374860"
            },
            "metanode": "Gene"
        },
        {
            "id": 38894,
            "identifier": "4664",
            "identifier_type": "int",
            "name": "NAB1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4664",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "NGFI-A binding protein 1 (EGR1 binding protein 1)"
            },
            "metanode": "Gene"
        },
        {
            "id": 38895,
            "identifier": "GO:0001658",
            "identifier_type": "str",
            "name": "branching involved in ureteric bud morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001658",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38896,
            "identifier": "GO:0070664",
            "identifier_type": "str",
            "name": "negative regulation of leukocyte proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070664",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 38897,
            "identifier": "GO:0052901",
            "identifier_type": "str",
            "name": "spermine:oxygen oxidoreductase (spermidine-forming) activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052901",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 38898,
            "identifier": "D020207",
            "identifier_type": "str",
            "name": "Coma, Post-Head Injury",
            "properties": {
                "url": "http://identifiers.org/mesh/D020207",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        }
    ]
}