Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=39000
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=39025", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=38975", "results": [ { "id": 38999, "identifier": "56852", "identifier_type": "int", "name": "RAD18", "properties": { "url": "http://identifiers.org/ncbigene/56852", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "RAD18 E3 ubiquitin protein ligase" }, "metanode": "Gene" }, { "id": 39000, "identifier": "C0398623", "identifier_type": "str", "name": "Thrombophilia", "properties": { "url": "http://identifiers.org/umls/C0398623", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 39001, "identifier": "100134391", "identifier_type": "int", "name": "LOC100134391", "properties": { "url": "http://identifiers.org/ncbigene/100134391", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "uncharacterized LOC100134391" }, "metanode": "Gene" }, { "id": 39002, "identifier": "GO:0007498", "identifier_type": "str", "name": "mesoderm development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0007498", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 39003, "identifier": "GO:0002086", "identifier_type": "str", "name": "diaphragm contraction", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002086", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 39004, "identifier": "1662", "identifier_type": "int", "name": "DDX10", "properties": { "url": "http://identifiers.org/ncbigene/1662", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10" }, "metanode": "Gene" }, { "id": 39005, "identifier": "10153", "identifier_type": "int", "name": "CEBPZ", "properties": { "url": "http://identifiers.org/ncbigene/10153", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "CCAAT/enhancer binding protein (C/EBP), zeta" }, "metanode": "Gene" }, { "id": 39006, "identifier": "GO:0031115", "identifier_type": "str", "name": "negative regulation of microtubule polymerization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031115", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 39007, "identifier": "55679", "identifier_type": "int", "name": "LIMS2", "properties": { "url": "http://identifiers.org/ncbigene/55679", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "LIM and senescent cell antigen-like domains 2" }, "metanode": "Gene" }, { "id": 39008, "identifier": "C0859290", "identifier_type": "str", "name": "Black spot", "properties": { "url": "http://identifiers.org/umls/C0859290", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 39009, "identifier": "UBERON:0000057", "identifier_type": "str", "name": "urethra", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0000057", "bto_id": "BTO:0001426", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D014521" }, "metanode": "Anatomy" }, { "id": 39010, "identifier": "GO:1990403", "identifier_type": "str", "name": "embryonic brain development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1990403", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 39011, "identifier": "3987", "identifier_type": "int", "name": "LIMS1", "properties": { "url": "http://identifiers.org/ncbigene/3987", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "LIM and senescent cell antigen-like domains 1" }, "metanode": "Gene" }, { "id": 39012, "identifier": "8654", "identifier_type": "int", "name": "PDE5A", "properties": { "url": "http://identifiers.org/ncbigene/8654", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "phosphodiesterase 5A, cGMP-specific" }, "metanode": "Gene" }, { "id": 39013, "identifier": "727936", "identifier_type": "int", "name": "GXYLT2", "properties": { "url": "http://identifiers.org/ncbigene/727936", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "glucoside xylosyltransferase 2" }, "metanode": "Gene" }, { "id": 39014, "identifier": "122742", "identifier_type": "int", "name": "OR4L1", "properties": { "url": "http://identifiers.org/ncbigene/122742", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "olfactory receptor, family 4, subfamily L, member 1" }, "metanode": "Gene" }, { "id": 39015, "identifier": "GO:1902235", "identifier_type": "str", "name": "regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902235", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 39016, "identifier": "348235", "identifier_type": "int", "name": "SKA2", "properties": { "url": "http://identifiers.org/ncbigene/348235", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "spindle and kinetochore associated complex subunit 2" }, "metanode": "Gene" }, { "id": 39017, "identifier": "22848", "identifier_type": "int", "name": "AAK1", "properties": { "url": "http://identifiers.org/ncbigene/22848", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "AP2 associated kinase 1" }, "metanode": "Gene" }, { "id": 39018, "identifier": "PC7_6966", "identifier_type": "str", "name": "Ribosomal scanning and start codon recognition", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 39019, "identifier": "GO:1902533", "identifier_type": "str", "name": "positive regulation of intracellular signal transduction", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902533", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 39020, "identifier": "C0235641", "identifier_type": "str", "name": "Perineal pain female", "properties": { "url": "http://identifiers.org/umls/C0235641", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 39021, "identifier": "GO:0010043", "identifier_type": "str", "name": "response to zinc ion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010043", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 39022, "identifier": "GO:0019614", "identifier_type": "str", "name": "catechol-containing compound catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019614", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 39023, "identifier": "DB00617", "identifier_type": "str", "name": "Paramethadione", "properties": { "url": "http://www.drugbank.ca/drugs/DB00617", "inchi": "InChI=1S/C7H11NO3/c1-4-7(2)5(9)8(3)6(10)11-7/h4H2,1-3H3", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=VQASKUSHBVDKGU-UHFFFAOYSA-N" }, "metanode": "Compound" } ] }