Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=40250

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=40275",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=40225",
    "results": [
        {
            "id": 40248,
            "identifier": "163126",
            "identifier_type": "int",
            "name": "EID2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/163126",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "EP300 interacting inhibitor of differentiation 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 40249,
            "identifier": "139105",
            "identifier_type": "int",
            "name": "BEND2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/139105",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "BEN domain containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 40250,
            "identifier": "GO:0045055",
            "identifier_type": "str",
            "name": "regulated exocytosis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045055",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40251,
            "identifier": "84259",
            "identifier_type": "int",
            "name": "DCUN1D5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84259",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "DCN1, defective in cullin neddylation 1, domain containing 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 40252,
            "identifier": "C0034734",
            "identifier_type": "str",
            "name": "Raynaud's disease",
            "properties": {
                "url": "http://identifiers.org/umls/C0034734",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40253,
            "identifier": "C0235213",
            "identifier_type": "str",
            "name": "Ejaculation decreased",
            "properties": {
                "url": "http://identifiers.org/umls/C0235213",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40254,
            "identifier": "114815",
            "identifier_type": "int",
            "name": "SORCS1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/114815",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "sortilin-related VPS10 domain containing receptor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 40255,
            "identifier": "GO:0034330",
            "identifier_type": "str",
            "name": "cell junction organization",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034330",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40256,
            "identifier": "C0272285",
            "identifier_type": "str",
            "name": "Heparin-induced thrombocytopenia",
            "properties": {
                "url": "http://identifiers.org/umls/C0272285",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40257,
            "identifier": "UBERON:0002113",
            "identifier_type": "str",
            "name": "kidney",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0002113",
                "bto_id": "BTO:0000671",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D007668"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 40258,
            "identifier": "6278",
            "identifier_type": "int",
            "name": "S100A7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6278",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "S100 calcium binding protein A7"
            },
            "metanode": "Gene"
        },
        {
            "id": 40259,
            "identifier": "DB00251",
            "identifier_type": "str",
            "name": "Terconazole",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00251",
                "inchi": "InChI=1S/C26H31Cl2N5O3/c1-19(2)31-9-11-32(12-10-31)21-4-6-22(7-5-21)34-14-23-15-35-26(36-23,16-33-18-29-17-30-33)24-8-3-20(27)13-25(24)28/h3-8,13,17-19,23H,9-12,14-16H2,1-2H3/t23-,26-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BLSQLHNBWJLIBQ-OZXSUGGESA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 40721,
            "identifier": "DOID:216",
            "identifier_type": "str",
            "name": "dental caries",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/DOID_216",
                "source": "Disease Ontology",
                "license": "CC BY 3.0"
            },
            "metanode": "Disease"
        },
        {
            "id": 40260,
            "identifier": "DB00557",
            "identifier_type": "str",
            "name": "Hydroxyzine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00557",
                "inchi": "InChI=1S/C21H27ClN2O2/c22-20-8-6-19(7-9-20)21(18-4-2-1-3-5-18)24-12-10-23(11-13-24)14-16-26-17-15-25/h1-9,21,25H,10-17H2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ZQDWXGKKHFNSQK-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 40261,
            "identifier": "91445",
            "identifier_type": "int",
            "name": "RNF185",
            "properties": {
                "url": "http://identifiers.org/ncbigene/91445",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "ring finger protein 185"
            },
            "metanode": "Gene"
        },
        {
            "id": 40262,
            "identifier": "GO:1990825",
            "identifier_type": "str",
            "name": "sequence-specific mRNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1990825",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 40263,
            "identifier": "GO:0043903",
            "identifier_type": "str",
            "name": "regulation of symbiosis, encompassing mutualism through parasitism",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043903",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40264,
            "identifier": "GO:0030828",
            "identifier_type": "str",
            "name": "positive regulation of cGMP biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030828",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40265,
            "identifier": "9601",
            "identifier_type": "int",
            "name": "PDIA4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9601",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "protein disulfide isomerase family A, member 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 40266,
            "identifier": "51004",
            "identifier_type": "int",
            "name": "COQ6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51004",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "coenzyme Q6 monooxygenase"
            },
            "metanode": "Gene"
        },
        {
            "id": 40267,
            "identifier": "3563",
            "identifier_type": "int",
            "name": "IL3RA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3563",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X|Y",
                "description": "interleukin 3 receptor, alpha (low affinity)"
            },
            "metanode": "Gene"
        },
        {
            "id": 40268,
            "identifier": "GO:0032990",
            "identifier_type": "str",
            "name": "cell part morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032990",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40269,
            "identifier": "C0036202",
            "identifier_type": "str",
            "name": "Sarcoidosis",
            "properties": {
                "url": "http://identifiers.org/umls/C0036202",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40270,
            "identifier": "C0158350",
            "identifier_type": "str",
            "name": "Tendinous contracture",
            "properties": {
                "url": "http://identifiers.org/umls/C0158350",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40271,
            "identifier": "GO:0072301",
            "identifier_type": "str",
            "name": "regulation of metanephric glomerular mesangial cell proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072301",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}