Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=40675

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=40700",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=40650",
    "results": [
        {
            "id": 40673,
            "identifier": "DB00118",
            "identifier_type": "str",
            "name": "S-Adenosylmethionine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00118",
                "inchi": "InChI=1S/C15H22N6O5S/c1-27(3-2-7(16)15(24)25)4-8-10(22)11(23)14(26-8)21-6-20-9-12(17)18-5-19-13(9)21/h5-8,10-11,14,22-23H,2-4,16H2,1H3,(H2-,17,18,19,24,25)/p+1/t7-,8+,10+,11+,14+,27?/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=MEFKEPWMEQBLKI-AIRLBKTGSA-O"
            },
            "metanode": "Compound"
        },
        {
            "id": 40674,
            "identifier": "C0221392",
            "identifier_type": "str",
            "name": "Vaginitis atrophic",
            "properties": {
                "url": "http://identifiers.org/umls/C0221392",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40675,
            "identifier": "GO:0030016",
            "identifier_type": "str",
            "name": "myofibril",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030016",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 40676,
            "identifier": "GO:0070236",
            "identifier_type": "str",
            "name": "negative regulation of activation-induced cell death of T cells",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070236",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40677,
            "identifier": "93134",
            "identifier_type": "int",
            "name": "ZNF561",
            "properties": {
                "url": "http://identifiers.org/ncbigene/93134",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 561"
            },
            "metanode": "Gene"
        },
        {
            "id": 40678,
            "identifier": "100288315",
            "identifier_type": "int",
            "name": "LOC100288315",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100288315",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "uncharacterized LOC100288315"
            },
            "metanode": "Gene"
        },
        {
            "id": 40679,
            "identifier": "6518",
            "identifier_type": "int",
            "name": "SLC2A5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6518",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "solute carrier family 2 (facilitated glucose/fructose transporter), member 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 40680,
            "identifier": "GO:2000794",
            "identifier_type": "str",
            "name": "regulation of epithelial cell proliferation involved in lung morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000794",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40681,
            "identifier": "GO:2001204",
            "identifier_type": "str",
            "name": "regulation of osteoclast development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2001204",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40682,
            "identifier": "C0151694",
            "identifier_type": "str",
            "name": "Hemorrhage of colon",
            "properties": {
                "url": "http://identifiers.org/umls/C0151694",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40683,
            "identifier": "9841",
            "identifier_type": "int",
            "name": "ZBTB24",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9841",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "zinc finger and BTB domain containing 24"
            },
            "metanode": "Gene"
        },
        {
            "id": 40684,
            "identifier": "51116",
            "identifier_type": "int",
            "name": "MRPS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51116",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "mitochondrial ribosomal protein S2"
            },
            "metanode": "Gene"
        },
        {
            "id": 40685,
            "identifier": "100289269",
            "identifier_type": "int",
            "name": "LOC100289269",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100289269",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "uncharacterized LOC100289269"
            },
            "metanode": "Gene"
        },
        {
            "id": 40719,
            "identifier": "11119",
            "identifier_type": "int",
            "name": "BTN3A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11119",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "butyrophilin, subfamily 3, member A1"
            },
            "metanode": "Gene"
        },
        {
            "id": 40686,
            "identifier": "DB00618",
            "identifier_type": "str",
            "name": "Demeclocycline",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00618",
                "inchi": "InChI=1S/C21H21ClN2O8/c1-24(2)14-7-5-6-10(16(27)12-9(25)4-3-8(22)11(12)15(6)26)18(29)21(7,32)19(30)13(17(14)28)20(23)31/h3-4,6-7,14-15,25-26,28-29,32H,5H2,1-2H3,(H2,23,31)/t6-,7-,14-,15-,21-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=FMTDIUIBLCQGJB-SEYHBJAFSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 40687,
            "identifier": "3675",
            "identifier_type": "int",
            "name": "ITGA3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3675",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)"
            },
            "metanode": "Gene"
        },
        {
            "id": 40688,
            "identifier": "GO:0033150",
            "identifier_type": "str",
            "name": "cytoskeletal calyx",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0033150",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 40689,
            "identifier": "C1688637",
            "identifier_type": "str",
            "name": "Intraoperative floppy iris syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C1688637",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40690,
            "identifier": "152586",
            "identifier_type": "int",
            "name": "MGAT4D",
            "properties": {
                "url": "http://identifiers.org/ncbigene/152586",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "MGAT4 family, member D"
            },
            "metanode": "Gene"
        },
        {
            "id": 40691,
            "identifier": "6128",
            "identifier_type": "int",
            "name": "RPL6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6128",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "ribosomal protein L6"
            },
            "metanode": "Gene"
        },
        {
            "id": 40692,
            "identifier": "10539",
            "identifier_type": "int",
            "name": "GLRX3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10539",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "glutaredoxin 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 40693,
            "identifier": "60561",
            "identifier_type": "int",
            "name": "RINT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/60561",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "RAD50 interactor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 40694,
            "identifier": "GO:0071603",
            "identifier_type": "str",
            "name": "endothelial cell-cell adhesion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071603",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40695,
            "identifier": "GO:0014050",
            "identifier_type": "str",
            "name": "negative regulation of glutamate secretion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0014050",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40696,
            "identifier": "GO:0034699",
            "identifier_type": "str",
            "name": "response to luteinizing hormone",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034699",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}