Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=40925

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=40950",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=40900",
    "results": [
        {
            "id": 40922,
            "identifier": "GO:0071280",
            "identifier_type": "str",
            "name": "cellular response to copper ion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071280",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40923,
            "identifier": "GO:0030249",
            "identifier_type": "str",
            "name": "guanylate cyclase regulator activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030249",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 40924,
            "identifier": "GO:2000451",
            "identifier_type": "str",
            "name": "positive regulation of CD8-positive, alpha-beta T cell extravasation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000451",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40925,
            "identifier": "C0549622",
            "identifier_type": "str",
            "name": "Sexual dysfunction",
            "properties": {
                "url": "http://identifiers.org/umls/C0549622",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40926,
            "identifier": "3957",
            "identifier_type": "int",
            "name": "LGALS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3957",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "lectin, galactoside-binding, soluble, 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 40927,
            "identifier": "8352",
            "identifier_type": "int",
            "name": "HIST1H3C",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8352",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "histone cluster 1, H3c"
            },
            "metanode": "Gene"
        },
        {
            "id": 40928,
            "identifier": "8745",
            "identifier_type": "int",
            "name": "ADAM23",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8745",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "ADAM metallopeptidase domain 23"
            },
            "metanode": "Gene"
        },
        {
            "id": 40929,
            "identifier": "GO:0014744",
            "identifier_type": "str",
            "name": "positive regulation of muscle adaptation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0014744",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40930,
            "identifier": "389123",
            "identifier_type": "int",
            "name": "IQCF2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/389123",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "IQ motif containing F2"
            },
            "metanode": "Gene"
        },
        {
            "id": 40931,
            "identifier": "2186",
            "identifier_type": "int",
            "name": "BPTF",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2186",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "bromodomain PHD finger transcription factor"
            },
            "metanode": "Gene"
        },
        {
            "id": 40932,
            "identifier": "10949",
            "identifier_type": "int",
            "name": "HNRNPA0",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10949",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "heterogeneous nuclear ribonucleoprotein A0"
            },
            "metanode": "Gene"
        },
        {
            "id": 40933,
            "identifier": "GO:0046125",
            "identifier_type": "str",
            "name": "pyrimidine deoxyribonucleoside metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046125",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40934,
            "identifier": "C0020505",
            "identifier_type": "str",
            "name": "Hyperphagia",
            "properties": {
                "url": "http://identifiers.org/umls/C0020505",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40935,
            "identifier": "653720",
            "identifier_type": "int",
            "name": "GOLGA8M",
            "properties": {
                "url": "http://identifiers.org/ncbigene/653720",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "golgin A8 family, member M"
            },
            "metanode": "Gene"
        },
        {
            "id": 40936,
            "identifier": "4655",
            "identifier_type": "int",
            "name": "MYSA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4655",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "description": "myasthenic (Lambert-Eaton) syndrome antigen A"
            },
            "metanode": "Gene"
        },
        {
            "id": 40937,
            "identifier": "GO:0035259",
            "identifier_type": "str",
            "name": "glucocorticoid receptor binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035259",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 40938,
            "identifier": "54677",
            "identifier_type": "int",
            "name": "CROT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54677",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "carnitine O-octanoyltransferase"
            },
            "metanode": "Gene"
        },
        {
            "id": 40939,
            "identifier": "PC7_4368",
            "identifier_type": "str",
            "name": "HIV Transcription Initiation",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 40940,
            "identifier": "GO:0031990",
            "identifier_type": "str",
            "name": "mRNA export from nucleus in response to heat stress",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0031990",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40941,
            "identifier": "57130",
            "identifier_type": "int",
            "name": "ATP13A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57130",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "ATPase type 13A1"
            },
            "metanode": "Gene"
        },
        {
            "id": 40942,
            "identifier": "DB00894",
            "identifier_type": "str",
            "name": "Testolactone",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00894",
                "inchi": "InChI=1S/C19H24O3/c1-18-9-7-13(20)11-12(18)3-4-14-15(18)8-10-19(2)16(14)5-6-17(21)22-19/h7,9,11,14-16H,3-6,8,10H2,1-2H3/t14-,15+,16+,18+,19+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BPEWUONYVDABNZ-DZBHQSCQSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 40943,
            "identifier": "C0522757",
            "identifier_type": "str",
            "name": "Exposure to toxic agent",
            "properties": {
                "url": "http://identifiers.org/umls/C0522757",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 40944,
            "identifier": "PC7_6879",
            "identifier_type": "str",
            "name": "Regulation of Commissural axon pathfinding by Slit and Robo",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 40945,
            "identifier": "148398",
            "identifier_type": "int",
            "name": "SAMD11",
            "properties": {
                "url": "http://identifiers.org/ncbigene/148398",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "sterile alpha motif domain containing 11"
            },
            "metanode": "Gene"
        },
        {
            "id": 40946,
            "identifier": "26073",
            "identifier_type": "int",
            "name": "POLDIP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26073",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "polymerase (DNA-directed), delta interacting protein 2"
            },
            "metanode": "Gene"
        }
    ]
}