Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=41000

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=41025",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=40975",
    "results": [
        {
            "id": 40996,
            "identifier": "91862",
            "identifier_type": "int",
            "name": "MARVELD3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/91862",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "MARVEL domain containing 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 40997,
            "identifier": "GO:0035524",
            "identifier_type": "str",
            "name": "proline transmembrane transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035524",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 40998,
            "identifier": "GO:0070080",
            "identifier_type": "str",
            "name": "titin Z domain binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070080",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 40999,
            "identifier": "399697",
            "identifier_type": "int",
            "name": "CTXN2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/399697",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "cortexin 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 41000,
            "identifier": "C0221021",
            "identifier_type": "str",
            "name": "Microangiopathic haemolytic anaemia",
            "properties": {
                "url": "http://identifiers.org/umls/C0221021",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41001,
            "identifier": "55740",
            "identifier_type": "int",
            "name": "ENAH",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55740",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "enabled homolog (Drosophila)"
            },
            "metanode": "Gene"
        },
        {
            "id": 41002,
            "identifier": "101929747",
            "identifier_type": "int",
            "name": "LOC101929747",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101929747",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "uncharacterized LOC101929747"
            },
            "metanode": "Gene"
        },
        {
            "id": 41003,
            "identifier": "337972",
            "identifier_type": "int",
            "name": "KRTAP19-5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/337972",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "keratin associated protein 19-5"
            },
            "metanode": "Gene"
        },
        {
            "id": 41004,
            "identifier": "C0877092",
            "identifier_type": "str",
            "name": "Venipuncture site bruise",
            "properties": {
                "url": "http://identifiers.org/umls/C0877092",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41005,
            "identifier": "9820",
            "identifier_type": "int",
            "name": "CUL7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9820",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "cullin 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 41006,
            "identifier": "C0267516",
            "identifier_type": "str",
            "name": "Colon atonic",
            "properties": {
                "url": "http://identifiers.org/umls/C0267516",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41007,
            "identifier": "C0338591",
            "identifier_type": "str",
            "name": "Transient global amnesia",
            "properties": {
                "url": "http://identifiers.org/umls/C0338591",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41008,
            "identifier": "200734",
            "identifier_type": "int",
            "name": "SPRED2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/200734",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "sprouty-related, EVH1 domain containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 41009,
            "identifier": "C0005586",
            "identifier_type": "str",
            "name": "Bipolar disorder",
            "properties": {
                "url": "http://identifiers.org/umls/C0005586",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41010,
            "identifier": "3654",
            "identifier_type": "int",
            "name": "IRAK1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3654",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "interleukin-1 receptor-associated kinase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 41011,
            "identifier": "GO:0086083",
            "identifier_type": "str",
            "name": "cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0086083",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 41012,
            "identifier": "154215",
            "identifier_type": "int",
            "name": "NKAIN2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/154215",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "Na+/K+ transporting ATPase interacting 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 41013,
            "identifier": "10518",
            "identifier_type": "int",
            "name": "CIB2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10518",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "calcium and integrin binding family member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 41014,
            "identifier": "GO:0002930",
            "identifier_type": "str",
            "name": "trabecular meshwork development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002930",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41015,
            "identifier": "GO:0032998",
            "identifier_type": "str",
            "name": "Fc-epsilon receptor I complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032998",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 41016,
            "identifier": "DB00115",
            "identifier_type": "str",
            "name": "Cyanocobalamin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00115",
                "inchi": "InChI=1S/C62H90N13O14P.CN.Co/c1-29-20-39-40(21-30(29)2)75(28-70-39)57-52(84)53(41(27-76)87-57)89-90(85,86)88-31(3)26-69-49(83)18-19-59(8)37(22-46(66)80)56-62(11)61(10,25-48(68)82)36(14-17-45(65)79)51(74-62)33(5)55-60(9,24-47(67)81)34(12-15-43(63)77)38(71-55)23-42-58(6,7)35(13-16-44(64)78)50(72-42)32(4)54(59)73-56;1-2;/h20-21,23,28,31,34-37,41,52-53,56-57,76,84H,12-19,22,24-27H2,1-11H3,(H15,63,64,65,66,67,68,69,71,72,73,74,77,78,79,80,81,82,83,85,86);;/q;;+1/p-1/t31-,34-,35-,36-,37+,41-,52-,53-,56-,57+,59-,60+,61+,62+;;/m1../s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=SEKGMJVHSBBHRD-WZHZPDAFSA-M"
            },
            "metanode": "Compound"
        },
        {
            "id": 41017,
            "identifier": "79753",
            "identifier_type": "int",
            "name": "SNIP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79753",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "Smad nuclear interacting protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 41018,
            "identifier": "C0016204",
            "identifier_type": "str",
            "name": "Flatulence",
            "properties": {
                "url": "http://identifiers.org/umls/C0016204",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41019,
            "identifier": "54502",
            "identifier_type": "int",
            "name": "RBM47",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54502",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "RNA binding motif protein 47"
            },
            "metanode": "Gene"
        },
        {
            "id": 41020,
            "identifier": "GO:1901343",
            "identifier_type": "str",
            "name": "negative regulation of vasculature development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901343",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}