Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=41050
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=41075", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=41025", "results": [ { "id": 41046, "identifier": "2335", "identifier_type": "int", "name": "FN1", "properties": { "url": "http://identifiers.org/ncbigene/2335", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "fibronectin 1" }, "metanode": "Gene" }, { "id": 41047, "identifier": "11082", "identifier_type": "int", "name": "ESM1", "properties": { "url": "http://identifiers.org/ncbigene/11082", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "endothelial cell-specific molecule 1" }, "metanode": "Gene" }, { "id": 41048, "identifier": "GO:0046974", "identifier_type": "str", "name": "histone methyltransferase activity (H3-K9 specific)", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046974", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 41049, "identifier": "91404", "identifier_type": "int", "name": "SESTD1", "properties": { "url": "http://identifiers.org/ncbigene/91404", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "SEC14 and spectrin domains 1" }, "metanode": "Gene" }, { "id": 41050, "identifier": "GO:0005871", "identifier_type": "str", "name": "kinesin complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005871", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 41051, "identifier": "GO:0030226", "identifier_type": "str", "name": "apolipoprotein receptor activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030226", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 41052, "identifier": "C0549202", "identifier_type": "str", "name": "Chapped skin", "properties": { "url": "http://identifiers.org/umls/C0549202", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 41053, "identifier": "54810", "identifier_type": "int", "name": "GIPC2", "properties": { "url": "http://identifiers.org/ncbigene/54810", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "GIPC PDZ domain containing family, member 2" }, "metanode": "Gene" }, { "id": 41054, "identifier": "GO:0000213", "identifier_type": "str", "name": "tRNA-intron endonuclease activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0000213", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 41055, "identifier": "85366", "identifier_type": "int", "name": "MYLK2", "properties": { "url": "http://identifiers.org/ncbigene/85366", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "myosin light chain kinase 2" }, "metanode": "Gene" }, { "id": 41056, "identifier": "GO:0045657", "identifier_type": "str", "name": "positive regulation of monocyte differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045657", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 41057, "identifier": "GO:0005997", "identifier_type": "str", "name": "xylulose metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005997", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 41058, "identifier": "GO:0021979", "identifier_type": "str", "name": "hypothalamus cell differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0021979", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 41059, "identifier": "22883", "identifier_type": "int", "name": "CLSTN1", "properties": { "url": "http://identifiers.org/ncbigene/22883", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "calsyntenin 1" }, "metanode": "Gene" }, { "id": 41060, "identifier": "7369", "identifier_type": "int", "name": "UMOD", "properties": { "url": "http://identifiers.org/ncbigene/7369", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "uromodulin" }, "metanode": "Gene" }, { "id": 41061, "identifier": "100129480", "identifier_type": "int", "name": "MKRN2OS", "properties": { "url": "http://identifiers.org/ncbigene/100129480", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "MKRN2 opposite strand" }, "metanode": "Gene" }, { "id": 41062, "identifier": "90161", "identifier_type": "int", "name": "HS6ST2", "properties": { "url": "http://identifiers.org/ncbigene/90161", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "heparan sulfate 6-O-sulfotransferase 2" }, "metanode": "Gene" }, { "id": 41063, "identifier": "GO:0071422", "identifier_type": "str", "name": "succinate transmembrane transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071422", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 41064, "identifier": "DB01321", "identifier_type": "str", "name": "Josamycin", "properties": { "url": "http://www.drugbank.ca/drugs/DB01321", "inchi": "InChI=1S/C42H69NO15/c1-23(2)19-32(47)56-40-27(6)53-34(22-42(40,8)50)57-37-26(5)54-41(36(49)35(37)43(9)10)58-38-29(17-18-44)20-24(3)30(46)16-14-12-13-15-25(4)52-33(48)21-31(39(38)51-11)55-28(7)45/h12-14,16,18,23-27,29-31,34-41,46,49-50H,15,17,19-22H2,1-11H3/b13-12+,16-14+/t24-,25-,26-,27+,29+,30+,31-,34+,35-,36-,37-,38+,39+,40+,41+,42-/m1/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=XJSFLOJWULLJQS-NGVXBBESSA-N" }, "metanode": "Compound" }, { "id": 41065, "identifier": "1945", "identifier_type": "int", "name": "EFNA4", "properties": { "url": "http://identifiers.org/ncbigene/1945", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "ephrin-A4" }, "metanode": "Gene" }, { "id": 41066, "identifier": "55764", "identifier_type": "int", "name": "IFT122", "properties": { "url": "http://identifiers.org/ncbigene/55764", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "intraflagellar transport 122" }, "metanode": "Gene" }, { "id": 41067, "identifier": "102724187", "identifier_type": "int", "name": "LOC102724187", "properties": { "url": "http://identifiers.org/ncbigene/102724187", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "uroplakin-3b-like protein-like" }, "metanode": "Gene" }, { "id": 41068, "identifier": "GO:0030166", "identifier_type": "str", "name": "proteoglycan biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030166", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 41069, "identifier": "125111", "identifier_type": "int", "name": "GJD3", "properties": { "url": "http://identifiers.org/ncbigene/125111", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "gap junction protein, delta 3, 31.9kDa" }, "metanode": "Gene" }, { "id": 41070, "identifier": "151112", "identifier_type": "int", "name": "ZSWIM2", "properties": { "url": "http://identifiers.org/ncbigene/151112", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "zinc finger, SWIM-type containing 2" }, "metanode": "Gene" } ] }