Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=41100

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=41125",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=41075",
    "results": [
        {
            "id": 41097,
            "identifier": "DB01206",
            "identifier_type": "str",
            "name": "Lomustine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01206",
                "inchi": "InChI=1S/C9H16ClN3O2/c10-6-7-13(12-15)9(14)11-8-4-2-1-3-5-8/h8H,1-7H2,(H,11,14)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GQYIWUVLTXOXAJ-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 41098,
            "identifier": "100533106",
            "identifier_type": "int",
            "name": "ZHX1-C8orf76",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100533106",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "ZHX1-C8orf76 readthrough"
            },
            "metanode": "Gene"
        },
        {
            "id": 41099,
            "identifier": "9389",
            "identifier_type": "int",
            "name": "SLC22A14",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9389",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "solute carrier family 22, member 14"
            },
            "metanode": "Gene"
        },
        {
            "id": 41100,
            "identifier": "GO:0052840",
            "identifier_type": "str",
            "name": "inositol diphosphate tetrakisphosphate diphosphatase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052840",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 41101,
            "identifier": "DB01058",
            "identifier_type": "str",
            "name": "Praziquantel",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01058",
                "inchi": "InChI=1S/C19H24N2O2/c22-18-13-20(19(23)15-7-2-1-3-8-15)12-17-16-9-5-4-6-14(16)10-11-21(17)18/h4-6,9,15,17H,1-3,7-8,10-13H2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=FSVJFNAIGNNGKK-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 41102,
            "identifier": "DB00176",
            "identifier_type": "str",
            "name": "Fluvoxamine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00176",
                "inchi": "InChI=1S/C15H21F3N2O2/c1-21-10-3-2-4-14(20-22-11-9-19)12-5-7-13(8-6-12)15(16,17)18/h5-8H,2-4,9-11,19H2,1H3/b20-14+",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CJOFXWAVKWHTFT-XSFVSMFZSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 41103,
            "identifier": "390144",
            "identifier_type": "int",
            "name": "OR5D16",
            "properties": {
                "url": "http://identifiers.org/ncbigene/390144",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 5, subfamily D, member 16"
            },
            "metanode": "Gene"
        },
        {
            "id": 41104,
            "identifier": "C0085624",
            "identifier_type": "str",
            "name": "Burning sensation",
            "properties": {
                "url": "http://identifiers.org/umls/C0085624",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41105,
            "identifier": "3223",
            "identifier_type": "int",
            "name": "HOXC6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3223",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "homeobox C6"
            },
            "metanode": "Gene"
        },
        {
            "id": 41106,
            "identifier": "GO:0061437",
            "identifier_type": "str",
            "name": "renal system vasculature development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061437",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41107,
            "identifier": "GO:0036473",
            "identifier_type": "str",
            "name": "cell death in response to oxidative stress",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0036473",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41108,
            "identifier": "GO:0072576",
            "identifier_type": "str",
            "name": "liver morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072576",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41109,
            "identifier": "7727",
            "identifier_type": "int",
            "name": "ZNF174",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7727",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "zinc finger protein 174"
            },
            "metanode": "Gene"
        },
        {
            "id": 41110,
            "identifier": "C0857093",
            "identifier_type": "str",
            "name": "Elevated liver enzyme levels",
            "properties": {
                "url": "http://identifiers.org/umls/C0857093",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41111,
            "identifier": "GO:0046645",
            "identifier_type": "str",
            "name": "positive regulation of gamma-delta T cell activation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046645",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41112,
            "identifier": "29937",
            "identifier_type": "int",
            "name": "NENF",
            "properties": {
                "url": "http://identifiers.org/ncbigene/29937",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "neudesin neurotrophic factor"
            },
            "metanode": "Gene"
        },
        {
            "id": 41113,
            "identifier": "5676",
            "identifier_type": "int",
            "name": "PSG7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5676",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)"
            },
            "metanode": "Gene"
        },
        {
            "id": 41114,
            "identifier": "10343",
            "identifier_type": "int",
            "name": "PKDREJ",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10343",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "polycystin (PKD) family receptor for egg jelly"
            },
            "metanode": "Gene"
        },
        {
            "id": 41115,
            "identifier": "51602",
            "identifier_type": "int",
            "name": "NOP58",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51602",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "NOP58 ribonucleoprotein"
            },
            "metanode": "Gene"
        },
        {
            "id": 41116,
            "identifier": "90649",
            "identifier_type": "int",
            "name": "ZNF486",
            "properties": {
                "url": "http://identifiers.org/ncbigene/90649",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 486"
            },
            "metanode": "Gene"
        },
        {
            "id": 41117,
            "identifier": "4161",
            "identifier_type": "int",
            "name": "MC5R",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4161",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "melanocortin 5 receptor"
            },
            "metanode": "Gene"
        },
        {
            "id": 41118,
            "identifier": "GO:0006552",
            "identifier_type": "str",
            "name": "leucine catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006552",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41119,
            "identifier": "GO:0097232",
            "identifier_type": "str",
            "name": "lamellar body membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097232",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 41120,
            "identifier": "56652",
            "identifier_type": "int",
            "name": "C10orf2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56652",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "chromosome 10 open reading frame 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 41121,
            "identifier": "27164",
            "identifier_type": "int",
            "name": "SALL3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27164",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "spalt-like transcription factor 3"
            },
            "metanode": "Gene"
        }
    ]
}