Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=41825

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=41850",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=41800",
    "results": [
        {
            "id": 41824,
            "identifier": "GO:0035184",
            "identifier_type": "str",
            "name": "histone threonine kinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035184",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 41825,
            "identifier": "GO:0022616",
            "identifier_type": "str",
            "name": "DNA strand elongation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0022616",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41861,
            "identifier": "GO:0044257",
            "identifier_type": "str",
            "name": "cellular protein catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044257",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41826,
            "identifier": "GO:0035947",
            "identifier_type": "str",
            "name": "regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035947",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41827,
            "identifier": "92305",
            "identifier_type": "int",
            "name": "TMEM129",
            "properties": {
                "url": "http://identifiers.org/ncbigene/92305",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "transmembrane protein 129, E3 ubiquitin protein ligase"
            },
            "metanode": "Gene"
        },
        {
            "id": 41828,
            "identifier": "GO:0016810",
            "identifier_type": "str",
            "name": "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016810",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 41829,
            "identifier": "GO:1904631",
            "identifier_type": "str",
            "name": "response to glucoside",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904631",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41830,
            "identifier": "GO:1903670",
            "identifier_type": "str",
            "name": "regulation of sprouting angiogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903670",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41831,
            "identifier": "55727",
            "identifier_type": "int",
            "name": "BTBD7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55727",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "BTB (POZ) domain containing 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 41832,
            "identifier": "101929211",
            "identifier_type": "int",
            "name": "LOC101929211",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101929211",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "proline-rich protein 2-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 41833,
            "identifier": "PC7_965",
            "identifier_type": "str",
            "name": "A tetrasaccharide linker sequence is required for GAG synthesis",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 41834,
            "identifier": "23444",
            "identifier_type": "int",
            "name": "CDW12",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23444",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "description": "CDw12 antigen"
            },
            "metanode": "Gene"
        },
        {
            "id": 41835,
            "identifier": "393",
            "identifier_type": "int",
            "name": "ARHGAP4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/393",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "Rho GTPase activating protein 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 41836,
            "identifier": "9156",
            "identifier_type": "int",
            "name": "EXO1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9156",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "exonuclease 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 41837,
            "identifier": "DB01098",
            "identifier_type": "str",
            "name": "Rosuvastatin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01098",
                "inchi": "InChI=1S/C22H28FN3O6S/c1-13(2)20-18(10-9-16(27)11-17(28)12-19(29)30)21(14-5-7-15(23)8-6-14)25-22(24-20)26(3)33(4,31)32/h5-10,13,16-17,27-28H,11-12H2,1-4H3,(H,29,30)/b10-9+/t16-,17-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BPRHUIZQVSMCRT-VEUZHWNKSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 41838,
            "identifier": "389799",
            "identifier_type": "int",
            "name": "C9orf171",
            "properties": {
                "url": "http://identifiers.org/ncbigene/389799",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "chromosome 9 open reading frame 171"
            },
            "metanode": "Gene"
        },
        {
            "id": 41839,
            "identifier": "GO:0030397",
            "identifier_type": "str",
            "name": "membrane disassembly",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030397",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 41840,
            "identifier": "27123",
            "identifier_type": "int",
            "name": "DKK2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27123",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "dickkopf WNT signaling pathway inhibitor 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 41841,
            "identifier": "2862",
            "identifier_type": "int",
            "name": "MLNR",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2862",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "motilin receptor"
            },
            "metanode": "Gene"
        },
        {
            "id": 41842,
            "identifier": "C0549294",
            "identifier_type": "str",
            "name": "Neutropenia aggravated",
            "properties": {
                "url": "http://identifiers.org/umls/C0549294",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41843,
            "identifier": "57551",
            "identifier_type": "int",
            "name": "TAOK1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57551",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "TAO kinase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 41844,
            "identifier": "C1735373",
            "identifier_type": "str",
            "name": "Acute uveitis",
            "properties": {
                "url": "http://identifiers.org/umls/C1735373",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 41845,
            "identifier": "5443",
            "identifier_type": "int",
            "name": "POMC",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5443",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "proopiomelanocortin"
            },
            "metanode": "Gene"
        },
        {
            "id": 41846,
            "identifier": "51241",
            "identifier_type": "int",
            "name": "COX16",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51241",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 41847,
            "identifier": "166815",
            "identifier_type": "int",
            "name": "TIGD2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/166815",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "tigger transposable element derived 2"
            },
            "metanode": "Gene"
        }
    ]
}