Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=41900
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=41925", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=41875", "results": [ { "id": 41899, "identifier": "5706", "identifier_type": "int", "name": "PSMC6", "properties": { "url": "http://identifiers.org/ncbigene/5706", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "proteasome (prosome, macropain) 26S subunit, ATPase, 6" }, "metanode": "Gene" }, { "id": 41900, "identifier": "4688", "identifier_type": "int", "name": "NCF2", "properties": { "url": "http://identifiers.org/ncbigene/4688", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "neutrophil cytosolic factor 2" }, "metanode": "Gene" }, { "id": 41901, "identifier": "54726", "identifier_type": "int", "name": "OTUD4", "properties": { "url": "http://identifiers.org/ncbigene/54726", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "OTU deubiquitinase 4" }, "metanode": "Gene" }, { "id": 41902, "identifier": "GO:0042518", "identifier_type": "str", "name": "negative regulation of tyrosine phosphorylation of Stat3 protein", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042518", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 41903, "identifier": "GO:0005178", "identifier_type": "str", "name": "integrin binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005178", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 41904, "identifier": "GO:0007031", "identifier_type": "str", "name": "peroxisome organization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0007031", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 41905, "identifier": "C0038325", "identifier_type": "str", "name": "Stevens-Johnson syndrome", "properties": { "url": "http://identifiers.org/umls/C0038325", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 41906, "identifier": "7157", "identifier_type": "int", "name": "TP53", "properties": { "url": "http://identifiers.org/ncbigene/7157", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "tumor protein p53" }, "metanode": "Gene" }, { "id": 41907, "identifier": "GO:0045023", "identifier_type": "str", "name": "G0 to G1 transition", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045023", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 41908, "identifier": "57179", "identifier_type": "int", "name": "KIAA1191", "properties": { "url": "http://identifiers.org/ncbigene/57179", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "KIAA1191" }, "metanode": "Gene" }, { "id": 41909, "identifier": "DOID:11054", "identifier_type": "str", "name": "urinary bladder cancer", "properties": { "url": "http://purl.obolibrary.org/obo/DOID_11054", "source": "Disease Ontology", "license": "CC BY 3.0" }, "metanode": "Disease" }, { "id": 41910, "identifier": "126526", "identifier_type": "int", "name": "C19orf47", "properties": { "url": "http://identifiers.org/ncbigene/126526", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "chromosome 19 open reading frame 47" }, "metanode": "Gene" }, { "id": 41911, "identifier": "1861", "identifier_type": "int", "name": "TOR1A", "properties": { "url": "http://identifiers.org/ncbigene/1861", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "torsin family 1, member A (torsin A)" }, "metanode": "Gene" }, { "id": 41912, "identifier": "55536", "identifier_type": "int", "name": "CDCA7L", "properties": { "url": "http://identifiers.org/ncbigene/55536", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "cell division cycle associated 7-like" }, "metanode": "Gene" }, { "id": 41913, "identifier": "90060", "identifier_type": "int", "name": "CCDC120", "properties": { "url": "http://identifiers.org/ncbigene/90060", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "coiled-coil domain containing 120" }, "metanode": "Gene" }, { "id": 41914, "identifier": "79085", "identifier_type": "int", "name": "SLC25A23", "properties": { "url": "http://identifiers.org/ncbigene/79085", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23" }, "metanode": "Gene" }, { "id": 41915, "identifier": "GO:0004385", "identifier_type": "str", "name": "guanylate kinase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004385", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 41916, "identifier": "218", "identifier_type": "int", "name": "ALDH3A1", "properties": { "url": "http://identifiers.org/ncbigene/218", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "aldehyde dehydrogenase 3 family, member A1" }, "metanode": "Gene" }, { "id": 41917, "identifier": "8725", "identifier_type": "int", "name": "URI1", "properties": { "url": "http://identifiers.org/ncbigene/8725", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "URI1, prefoldin-like chaperone" }, "metanode": "Gene" }, { "id": 41918, "identifier": "PC7_5327", "identifier_type": "str", "name": "Metabolism of mRNA", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 41919, "identifier": "C0948594", "identifier_type": "str", "name": "Musculoskeletal discomfort", "properties": { "url": "http://identifiers.org/umls/C0948594", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 41920, "identifier": "728279", "identifier_type": "int", "name": "KRTAP2-2", "properties": { "url": "http://identifiers.org/ncbigene/728279", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "keratin associated protein 2-2" }, "metanode": "Gene" }, { "id": 41921, "identifier": "GO:1902623", "identifier_type": "str", "name": "negative regulation of neutrophil migration", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902623", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 41922, "identifier": "284297", "identifier_type": "int", "name": "SSC5D", "properties": { "url": "http://identifiers.org/ncbigene/284297", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "scavenger receptor cysteine rich family, 5 domains" }, "metanode": "Gene" }, { "id": 41923, "identifier": "2687", "identifier_type": "int", "name": "GGT5", "properties": { "url": "http://identifiers.org/ncbigene/2687", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "gamma-glutamyltransferase 5" }, "metanode": "Gene" } ] }