Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=43100
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43125", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43075", "results": [ { "id": 43099, "identifier": "WP2828_r79529", "identifier_type": "str", "name": "Bladder Cancer", "properties": { "url": "http://www.wikipathways.org/instance/WP2828_r79529", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 43100, "identifier": "340980", "identifier_type": "int", "name": "OR52B6", "properties": { "url": "http://identifiers.org/ncbigene/340980", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "olfactory receptor, family 52, subfamily B, member 6" }, "metanode": "Gene" }, { "id": 43101, "identifier": "391002", "identifier_type": "int", "name": "PRAMEF8", "properties": { "url": "http://identifiers.org/ncbigene/391002", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "PRAME family member 8" }, "metanode": "Gene" }, { "id": 43102, "identifier": "219952", "identifier_type": "int", "name": "OR6Q1", "properties": { "url": "http://identifiers.org/ncbigene/219952", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "olfactory receptor, family 6, subfamily Q, member 1 (gene/pseudogene)" }, "metanode": "Gene" }, { "id": 43103, "identifier": "79618", "identifier_type": "int", "name": "HMBOX1", "properties": { "url": "http://identifiers.org/ncbigene/79618", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "homeobox containing 1" }, "metanode": "Gene" }, { "id": 43104, "identifier": "8476", "identifier_type": "int", "name": "CDC42BPA", "properties": { "url": "http://identifiers.org/ncbigene/8476", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "CDC42 binding protein kinase alpha (DMPK-like)" }, "metanode": "Gene" }, { "id": 43105, "identifier": "C0040434", "identifier_type": "str", "name": "Tooth discolouration", "properties": { "url": "http://identifiers.org/umls/C0040434", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43106, "identifier": "58498", "identifier_type": "int", "name": "MYL7", "properties": { "url": "http://identifiers.org/ncbigene/58498", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "myosin, light chain 7, regulatory" }, "metanode": "Gene" }, { "id": 43107, "identifier": "GO:0043373", "identifier_type": "str", "name": "CD4-positive, alpha-beta T cell lineage commitment", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043373", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43108, "identifier": "PC7_3886", "identifier_type": "str", "name": "Fcgamma receptor (FCGR) dependent phagocytosis", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 43109, "identifier": "284048", "identifier_type": "int", "name": "LOC284048", "properties": { "url": "http://identifiers.org/ncbigene/284048", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "FLJ11800 related gene" }, "metanode": "Gene" }, { "id": 43110, "identifier": "GO:0070885", "identifier_type": "str", "name": "negative regulation of calcineurin-NFAT signaling cascade", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070885", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43111, "identifier": "GO:0060368", "identifier_type": "str", "name": "regulation of Fc receptor mediated stimulatory signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060368", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43112, "identifier": "C0235309", "identifier_type": "str", "name": "Upset stomach", "properties": { "url": "http://identifiers.org/umls/C0235309", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43113, "identifier": "643596", "identifier_type": "int", "name": "RNF224", "properties": { "url": "http://identifiers.org/ncbigene/643596", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "ring finger protein 224" }, "metanode": "Gene" }, { "id": 43114, "identifier": "GO:0002291", "identifier_type": "str", "name": "T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002291", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43115, "identifier": "C0235847", "identifier_type": "str", "name": "Hyperhemoglobinemia", "properties": { "url": "http://identifiers.org/umls/C0235847", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43116, "identifier": "4763", "identifier_type": "int", "name": "NF1", "properties": { "url": "http://identifiers.org/ncbigene/4763", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "neurofibromin 1" }, "metanode": "Gene" }, { "id": 43117, "identifier": "GO:0072310", "identifier_type": "str", "name": "glomerular epithelial cell development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0072310", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43118, "identifier": "54785", "identifier_type": "int", "name": "C17orf59", "properties": { "url": "http://identifiers.org/ncbigene/54785", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "chromosome 17 open reading frame 59" }, "metanode": "Gene" }, { "id": 43119, "identifier": "GO:1903010", "identifier_type": "str", "name": "regulation of bone development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903010", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43120, "identifier": "PC7_7423", "identifier_type": "str", "name": "Sema4D induced cell migration and growth-cone collapse", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 43121, "identifier": "GO:0003158", "identifier_type": "str", "name": "endothelium development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0003158", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43122, "identifier": "22858", "identifier_type": "int", "name": "ICK", "properties": { "url": "http://identifiers.org/ncbigene/22858", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "intestinal cell (MAK-like) kinase" }, "metanode": "Gene" }, { "id": 43123, "identifier": "GO:0035005", "identifier_type": "str", "name": "1-phosphatidylinositol-4-phosphate 3-kinase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035005", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" } ] }