Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=43275

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43300",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43250",
    "results": [
        {
            "id": 43274,
            "identifier": "C0234952",
            "identifier_type": "str",
            "name": "Oropharyngeal spasm",
            "properties": {
                "url": "http://identifiers.org/umls/C0234952",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 43275,
            "identifier": "C0272891",
            "identifier_type": "str",
            "name": "Knee sprain",
            "properties": {
                "url": "http://identifiers.org/umls/C0272891",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 43276,
            "identifier": "GO:0006887",
            "identifier_type": "str",
            "name": "exocytosis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006887",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43277,
            "identifier": "5476",
            "identifier_type": "int",
            "name": "CTSA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5476",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "cathepsin A"
            },
            "metanode": "Gene"
        },
        {
            "id": 43278,
            "identifier": "C0042548",
            "identifier_type": "str",
            "name": "Plantar warts",
            "properties": {
                "url": "http://identifiers.org/umls/C0042548",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 43279,
            "identifier": "GO:0071065",
            "identifier_type": "str",
            "name": "alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071065",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 43280,
            "identifier": "105375661",
            "identifier_type": "int",
            "name": "LOC105375661",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105375661",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "collagen alpha-1(I) chain-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 43281,
            "identifier": "GO:0010748",
            "identifier_type": "str",
            "name": "negative regulation of plasma membrane long-chain fatty acid transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010748",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43282,
            "identifier": "401145",
            "identifier_type": "int",
            "name": "CCSER1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/401145",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "coiled-coil serine-rich protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 43283,
            "identifier": "UBERON:0000010",
            "identifier_type": "str",
            "name": "peripheral nervous system",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0000010",
                "bto_id": "BTO:0001028",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D017933"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 43284,
            "identifier": "GO:0032347",
            "identifier_type": "str",
            "name": "regulation of aldosterone biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032347",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43285,
            "identifier": "286068",
            "identifier_type": "int",
            "name": "LOC286068",
            "properties": {
                "url": "http://identifiers.org/ncbigene/286068",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "uncharacterized LOC286068"
            },
            "metanode": "Gene"
        },
        {
            "id": 43286,
            "identifier": "10566",
            "identifier_type": "int",
            "name": "AKAP3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10566",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "A kinase (PRKA) anchor protein 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 43287,
            "identifier": "GO:0021823",
            "identifier_type": "str",
            "name": "cerebral cortex tangential migration using cell-cell interactions",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021823",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43288,
            "identifier": "D000647",
            "identifier_type": "str",
            "name": "Amnesia",
            "properties": {
                "url": "http://identifiers.org/mesh/D000647",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 43289,
            "identifier": "GO:0002023",
            "identifier_type": "str",
            "name": "reduction of food intake in response to dietary excess",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002023",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43290,
            "identifier": "1006",
            "identifier_type": "int",
            "name": "CDH8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1006",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "cadherin 8, type 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 43291,
            "identifier": "9497",
            "identifier_type": "int",
            "name": "SLC4A7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9497",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "solute carrier family 4, sodium bicarbonate cotransporter, member 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 43292,
            "identifier": "51028",
            "identifier_type": "int",
            "name": "VPS36",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51028",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "vacuolar protein sorting 36 homolog (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 43293,
            "identifier": "PC7_3999",
            "identifier_type": "str",
            "name": "G-protein activation",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 43294,
            "identifier": "GO:0021529",
            "identifier_type": "str",
            "name": "spinal cord oligodendrocyte cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021529",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43295,
            "identifier": "GO:1901722",
            "identifier_type": "str",
            "name": "regulation of cell proliferation involved in kidney development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901722",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43296,
            "identifier": "GO:0002430",
            "identifier_type": "str",
            "name": "complement receptor mediated signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002430",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43297,
            "identifier": "DB01201",
            "identifier_type": "str",
            "name": "Rifapentine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01201",
                "inchi": "InChI=1S/C47H64N4O12/c1-24-13-12-14-25(2)46(59)49-37-32(23-48-51-20-18-50(19-21-51)31-15-10-11-16-31)41(56)34-35(42(37)57)40(55)29(6)44-36(34)45(58)47(8,63-44)61-22-17-33(60-9)26(3)43(62-30(7)52)28(5)39(54)27(4)38(24)53/h12-14,17,22-24,26-28,31,33,38-39,43,53-57H,10-11,15-16,18-21H2,1-9H3,(H,49,59)/b13-12+,22-17+,25-14-,48-23+/t24-,26+,27+,28+,33-,38-,39+,43+,47-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=WDZCUPBHRAEYDL-GZAUEHORSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 43298,
            "identifier": "643905",
            "identifier_type": "int",
            "name": "PRR21",
            "properties": {
                "url": "http://identifiers.org/ncbigene/643905",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "proline rich 21"
            },
            "metanode": "Gene"
        }
    ]
}