Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=43400
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43425", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43375", "results": [ { "id": 43399, "identifier": "UBERON:0002185", "identifier_type": "str", "name": "bronchus", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0002185", "bto_id": "BTO:0001340", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D001980" }, "metanode": "Anatomy" }, { "id": 43400, "identifier": "644054", "identifier_type": "int", "name": "FAM25C", "properties": { "url": "http://identifiers.org/ncbigene/644054", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "family with sequence similarity 25, member C" }, "metanode": "Gene" }, { "id": 43401, "identifier": "GO:0005089", "identifier_type": "str", "name": "Rho guanyl-nucleotide exchange factor activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005089", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 43402, "identifier": "GO:0046219", "identifier_type": "str", "name": "indolalkylamine biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046219", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43403, "identifier": "5933", "identifier_type": "int", "name": "RBL1", "properties": { "url": "http://identifiers.org/ncbigene/5933", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "retinoblastoma-like 1" }, "metanode": "Gene" }, { "id": 43404, "identifier": "10584", "identifier_type": "int", "name": "COLEC10", "properties": { "url": "http://identifiers.org/ncbigene/10584", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "collectin sub-family member 10 (C-type lectin)" }, "metanode": "Gene" }, { "id": 43405, "identifier": "C0026948", "identifier_type": "str", "name": "Mycosis fungoides", "properties": { "url": "http://identifiers.org/umls/C0026948", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43406, "identifier": "PC7_6200", "identifier_type": "str", "name": "POU5F1 (OCT4), SOX2, NANOG activate genes related to proliferation", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 43407, "identifier": "GO:0036304", "identifier_type": "str", "name": "umbilical cord morphogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0036304", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43408, "identifier": "342357", "identifier_type": "int", "name": "ZKSCAN2", "properties": { "url": "http://identifiers.org/ncbigene/342357", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "zinc finger with KRAB and SCAN domains 2" }, "metanode": "Gene" }, { "id": 43409, "identifier": "C1142072", "identifier_type": "str", "name": "Oral toxicity", "properties": { "url": "http://identifiers.org/umls/C1142072", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43410, "identifier": "C1868879", "identifier_type": "str", "name": "Endotracheal tube obstruction", "properties": { "url": "http://identifiers.org/umls/C1868879", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43411, "identifier": "144125", "identifier_type": "int", "name": "OR2AG1", "properties": { "url": "http://identifiers.org/ncbigene/144125", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene)" }, "metanode": "Gene" }, { "id": 43412, "identifier": "GO:0071782", "identifier_type": "str", "name": "endoplasmic reticulum tubular network", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071782", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 43413, "identifier": "GO:0017169", "identifier_type": "str", "name": "CDP-alcohol phosphatidyltransferase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0017169", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 43414, "identifier": "GO:0010882", "identifier_type": "str", "name": "regulation of cardiac muscle contraction by calcium ion signaling", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010882", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43415, "identifier": "6887", "identifier_type": "int", "name": "TAL2", "properties": { "url": "http://identifiers.org/ncbigene/6887", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "T-cell acute lymphocytic leukemia 2" }, "metanode": "Gene" }, { "id": 43416, "identifier": "C0857361", "identifier_type": "str", "name": "Headache occurring", "properties": { "url": "http://identifiers.org/umls/C0857361", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43417, "identifier": "GO:0031362", "identifier_type": "str", "name": "anchored component of external side of plasma membrane", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031362", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 43418, "identifier": "C0855237", "identifier_type": "str", "name": "Social avoidant behaviour", "properties": { "url": "http://identifiers.org/umls/C0855237", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43419, "identifier": "1463", "identifier_type": "int", "name": "NCAN", "properties": { "url": "http://identifiers.org/ncbigene/1463", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "neurocan" }, "metanode": "Gene" }, { "id": 43420, "identifier": "10210", "identifier_type": "int", "name": "TOPORS", "properties": { "url": "http://identifiers.org/ncbigene/10210", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase" }, "metanode": "Gene" }, { "id": 43421, "identifier": "100129271", "identifier_type": "int", "name": "C1orf68", "properties": { "url": "http://identifiers.org/ncbigene/100129271", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "chromosome 1 open reading frame 68" }, "metanode": "Gene" }, { "id": 43422, "identifier": "GO:0051963", "identifier_type": "str", "name": "regulation of synapse assembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051963", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43423, "identifier": "GO:0008201", "identifier_type": "str", "name": "heparin binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0008201", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" } ] }