Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=4350

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=4375",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=4325",
    "results": [
        {
            "id": 4335,
            "identifier": "DB00661",
            "identifier_type": "str",
            "name": "Verapamil",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00661",
                "inchi": "InChI=1S/C27H38N2O4/c1-20(2)27(19-28,22-10-12-24(31-5)26(18-22)33-7)14-8-15-29(3)16-13-21-9-11-23(30-4)25(17-21)32-6/h9-12,17-18,20H,8,13-16H2,1-7H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=SGTNSNPWRIOYBX-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 4336,
            "identifier": "64428",
            "identifier_type": "int",
            "name": "NARFL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/64428",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "nuclear prelamin A recognition factor-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 4337,
            "identifier": "GO:0046173",
            "identifier_type": "str",
            "name": "polyol biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046173",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 4338,
            "identifier": "GO:0004473",
            "identifier_type": "str",
            "name": "malate dehydrogenase (decarboxylating) (NADP+) activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004473",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 4339,
            "identifier": "C0232097",
            "identifier_type": "str",
            "name": "Volume plasma increased",
            "properties": {
                "url": "http://identifiers.org/umls/C0232097",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 4340,
            "identifier": "9110",
            "identifier_type": "int",
            "name": "MTMR4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9110",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "myotubularin related protein 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 4341,
            "identifier": "440503",
            "identifier_type": "int",
            "name": "PLIN5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/440503",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "perilipin 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 4342,
            "identifier": "219874",
            "identifier_type": "int",
            "name": "OR6T1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/219874",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 6, subfamily T, member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 4343,
            "identifier": "GO:0042720",
            "identifier_type": "str",
            "name": "mitochondrial inner membrane peptidase complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042720",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 4344,
            "identifier": "C0035317",
            "identifier_type": "str",
            "name": "Retinal haemorrhage",
            "properties": {
                "url": "http://identifiers.org/umls/C0035317",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 4345,
            "identifier": "340152",
            "identifier_type": "int",
            "name": "ZC3H12D",
            "properties": {
                "url": "http://identifiers.org/ncbigene/340152",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "zinc finger CCCH-type containing 12D"
            },
            "metanode": "Gene"
        },
        {
            "id": 4346,
            "identifier": "DB00881",
            "identifier_type": "str",
            "name": "Quinapril",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00881",
                "inchi": "InChI=1S/C25H30N2O5/c1-3-32-25(31)21(14-13-18-9-5-4-6-10-18)26-17(2)23(28)27-16-20-12-8-7-11-19(20)15-22(27)24(29)30/h4-12,17,21-22,26H,3,13-16H2,1-2H3,(H,29,30)/t17-,21-,22-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JSDRRTOADPPCHY-HSQYWUDLSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 4347,
            "identifier": "GO:0046449",
            "identifier_type": "str",
            "name": "creatinine metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0046449",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 4348,
            "identifier": "57489",
            "identifier_type": "int",
            "name": "ODF2L",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57489",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "outer dense fiber of sperm tails 2-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 4349,
            "identifier": "80152",
            "identifier_type": "int",
            "name": "CENPT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80152",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "centromere protein T"
            },
            "metanode": "Gene"
        },
        {
            "id": 4350,
            "identifier": "105378862",
            "identifier_type": "int",
            "name": "LOC105378862",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105378862",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "uncharacterized LOC105378862"
            },
            "metanode": "Gene"
        },
        {
            "id": 4351,
            "identifier": "51451",
            "identifier_type": "int",
            "name": "LCMT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51451",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "leucine carboxyl methyltransferase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 4352,
            "identifier": "UBERON:0001760",
            "identifier_type": "str",
            "name": "frontal sinus",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0001760",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D005626"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 4353,
            "identifier": "130557",
            "identifier_type": "int",
            "name": "ZNF513",
            "properties": {
                "url": "http://identifiers.org/ncbigene/130557",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "zinc finger protein 513"
            },
            "metanode": "Gene"
        },
        {
            "id": 4354,
            "identifier": "PC7_1653",
            "identifier_type": "str",
            "name": "Amplification of signal from the kinetochores",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 4355,
            "identifier": "285636",
            "identifier_type": "int",
            "name": "C5orf51",
            "properties": {
                "url": "http://identifiers.org/ncbigene/285636",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "chromosome 5 open reading frame 51"
            },
            "metanode": "Gene"
        },
        {
            "id": 4356,
            "identifier": "7850",
            "identifier_type": "int",
            "name": "IL1R2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7850",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "interleukin 1 receptor, type II"
            },
            "metanode": "Gene"
        },
        {
            "id": 4357,
            "identifier": "57232",
            "identifier_type": "int",
            "name": "ZNF630",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57232",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "zinc finger protein 630"
            },
            "metanode": "Gene"
        },
        {
            "id": 4358,
            "identifier": "84332",
            "identifier_type": "int",
            "name": "DYDC2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84332",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "DPY30 domain containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 4359,
            "identifier": "D002559",
            "identifier_type": "str",
            "name": "Cerebrospinal Fluid Rhinorrhea",
            "properties": {
                "url": "http://identifiers.org/mesh/D002559",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        }
    ]
}