Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=43500

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43525",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43475",
    "results": [
        {
            "id": 43498,
            "identifier": "6440",
            "identifier_type": "int",
            "name": "SFTPC",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6440",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "surfactant protein C"
            },
            "metanode": "Gene"
        },
        {
            "id": 43499,
            "identifier": "56478",
            "identifier_type": "int",
            "name": "EIF4ENIF1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56478",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "eukaryotic translation initiation factor 4E nuclear import factor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 43500,
            "identifier": "1795",
            "identifier_type": "int",
            "name": "DOCK3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1795",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "dedicator of cytokinesis 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 43501,
            "identifier": "1272",
            "identifier_type": "int",
            "name": "CNTN1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1272",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "contactin 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 43502,
            "identifier": "C0541831",
            "identifier_type": "str",
            "name": "Choreiform",
            "properties": {
                "url": "http://identifiers.org/umls/C0541831",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 43503,
            "identifier": "170393",
            "identifier_type": "int",
            "name": "C10orf91",
            "properties": {
                "url": "http://identifiers.org/ncbigene/170393",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "chromosome 10 open reading frame 91"
            },
            "metanode": "Gene"
        },
        {
            "id": 43504,
            "identifier": "GO:0002761",
            "identifier_type": "str",
            "name": "regulation of myeloid leukocyte differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002761",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43505,
            "identifier": "DOID:1319",
            "identifier_type": "str",
            "name": "brain cancer",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/DOID_1319",
                "source": "Disease Ontology",
                "license": "CC BY 3.0"
            },
            "metanode": "Disease"
        },
        {
            "id": 43506,
            "identifier": "GO:1902956",
            "identifier_type": "str",
            "name": "regulation of mitochondrial electron transport, NADH to ubiquinone",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902956",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43507,
            "identifier": "C0584995",
            "identifier_type": "str",
            "name": "Writing impaired",
            "properties": {
                "url": "http://identifiers.org/umls/C0584995",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 43508,
            "identifier": "GO:0001594",
            "identifier_type": "str",
            "name": "trace-amine receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001594",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 43509,
            "identifier": "C0221030",
            "identifier_type": "str",
            "name": "Hyperviscosity syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C0221030",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 43510,
            "identifier": "3613",
            "identifier_type": "int",
            "name": "IMPA2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3613",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "inositol(myo)-1(or 4)-monophosphatase 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 43511,
            "identifier": "8717",
            "identifier_type": "int",
            "name": "TRADD",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8717",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "TNFRSF1A-associated via death domain"
            },
            "metanode": "Gene"
        },
        {
            "id": 43512,
            "identifier": "PC7_8231",
            "identifier_type": "str",
            "name": "The phototransduction cascade",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 43513,
            "identifier": "GO:0070877",
            "identifier_type": "str",
            "name": "microprocessor complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070877",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 43514,
            "identifier": "GO:0070525",
            "identifier_type": "str",
            "name": "tRNA threonylcarbamoyladenosine metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070525",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43515,
            "identifier": "GO:0071930",
            "identifier_type": "str",
            "name": "negative regulation of transcription involved in G1/S transition of mitotic cell cycle",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0071930",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43516,
            "identifier": "10733",
            "identifier_type": "int",
            "name": "PLK4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10733",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "polo-like kinase 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 43517,
            "identifier": "22873",
            "identifier_type": "int",
            "name": "DZIP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/22873",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "DAZ interacting zinc finger protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 43518,
            "identifier": "GO:0050662",
            "identifier_type": "str",
            "name": "coenzyme binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0050662",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 43519,
            "identifier": "DB01047",
            "identifier_type": "str",
            "name": "Fluocinonide",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01047",
                "inchi": "InChI=1S/C26H32F2O7/c1-13(29)33-12-20(32)26-21(34-22(2,3)35-26)10-15-16-9-18(27)17-8-14(30)6-7-23(17,4)25(16,28)19(31)11-24(15,26)5/h6-8,15-16,18-19,21,31H,9-12H2,1-5H3/t15-,16-,18-,19-,21+,23-,24-,25-,26+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=WJOHZNCJWYWUJD-IUGZLZTKSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 43520,
            "identifier": "54461",
            "identifier_type": "int",
            "name": "FBXW5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54461",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "F-box and WD repeat domain containing 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 43521,
            "identifier": "GO:0009124",
            "identifier_type": "str",
            "name": "nucleoside monophosphate biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009124",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43522,
            "identifier": "GO:0007194",
            "identifier_type": "str",
            "name": "negative regulation of adenylate cyclase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007194",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}