Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=43625
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43650", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43600", "results": [ { "id": 43623, "identifier": "117579", "identifier_type": "int", "name": "RLN3", "properties": { "url": "http://identifiers.org/ncbigene/117579", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "relaxin 3" }, "metanode": "Gene" }, { "id": 43624, "identifier": "105376902", "identifier_type": "int", "name": "LOC105376902", "properties": { "url": "http://identifiers.org/ncbigene/105376902", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "uncharacterized LOC105376902" }, "metanode": "Gene" }, { "id": 43625, "identifier": "GO:0016500", "identifier_type": "str", "name": "protein-hormone receptor activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016500", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 43626, "identifier": "1293", "identifier_type": "int", "name": "COL6A3", "properties": { "url": "http://identifiers.org/ncbigene/1293", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "collagen, type VI, alpha 3" }, "metanode": "Gene" }, { "id": 43627, "identifier": "9912", "identifier_type": "int", "name": "ARHGAP44", "properties": { "url": "http://identifiers.org/ncbigene/9912", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "Rho GTPase activating protein 44" }, "metanode": "Gene" }, { "id": 43628, "identifier": "C0851647", "identifier_type": "str", "name": "Muscle tone disorder", "properties": { "url": "http://identifiers.org/umls/C0851647", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43629, "identifier": "3746", "identifier_type": "int", "name": "KCNC1", "properties": { "url": "http://identifiers.org/ncbigene/3746", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "potassium channel, voltage gated Shaw related subfamily C, member 1" }, "metanode": "Gene" }, { "id": 43630, "identifier": "C0034880", "identifier_type": "str", "name": "Hyperacusis", "properties": { "url": "http://identifiers.org/umls/C0034880", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43631, "identifier": "C0151589", "identifier_type": "str", "name": "Partial transitory deafness", "properties": { "url": "http://identifiers.org/umls/C0151589", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43632, "identifier": "GO:0051222", "identifier_type": "str", "name": "positive regulation of protein transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051222", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43633, "identifier": "GO:0008320", "identifier_type": "str", "name": "protein transmembrane transporter activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0008320", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 43634, "identifier": "C0578455", "identifier_type": "str", "name": "Abscess limb", "properties": { "url": "http://identifiers.org/umls/C0578455", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43635, "identifier": "PC7_2627", "identifier_type": "str", "name": "Class II GLUTs", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 43636, "identifier": "283985", "identifier_type": "int", "name": "FADS6", "properties": { "url": "http://identifiers.org/ncbigene/283985", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "fatty acid desaturase 6" }, "metanode": "Gene" }, { "id": 43637, "identifier": "2247", "identifier_type": "int", "name": "FGF2", "properties": { "url": "http://identifiers.org/ncbigene/2247", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "fibroblast growth factor 2 (basic)" }, "metanode": "Gene" }, { "id": 43638, "identifier": "PC7_1519", "identifier_type": "str", "name": "Activation and oligomerization of BAK protein", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 43639, "identifier": "C0032266", "identifier_type": "str", "name": "Pneumatosis cystoides intestinalis", "properties": { "url": "http://identifiers.org/umls/C0032266", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43640, "identifier": "GO:1900247", "identifier_type": "str", "name": "regulation of cytoplasmic translational elongation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1900247", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43641, "identifier": "353332", "identifier_type": "int", "name": "KRTAP12-1", "properties": { "url": "http://identifiers.org/ncbigene/353332", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "21", "description": "keratin associated protein 12-1" }, "metanode": "Gene" }, { "id": 43642, "identifier": "DB00489", "identifier_type": "str", "name": "Sotalol", "properties": { "url": "http://www.drugbank.ca/drugs/DB00489", "inchi": "InChI=1S/C12H20N2O3S/c1-9(2)13-8-12(15)10-4-6-11(7-5-10)14-18(3,16)17/h4-7,9,12-15H,8H2,1-3H3", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=ZBMZVLHSJCTVON-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 43643, "identifier": "653781", "identifier_type": "int", "name": "POTEJ", "properties": { "url": "http://identifiers.org/ncbigene/653781", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "POTE ankyrin domain family, member J" }, "metanode": "Gene" }, { "id": 43644, "identifier": "155382", "identifier_type": "int", "name": "VPS37D", "properties": { "url": "http://identifiers.org/ncbigene/155382", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "vacuolar protein sorting 37 homolog D (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 43645, "identifier": "C0856825", "identifier_type": "str", "name": "Acute graft versus host disease", "properties": { "url": "http://identifiers.org/umls/C0856825", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43646, "identifier": "GO:0033202", "identifier_type": "str", "name": "DNA helicase complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033202", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 43647, "identifier": "6271", "identifier_type": "int", "name": "S100A1", "properties": { "url": "http://identifiers.org/ncbigene/6271", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "S100 calcium binding protein A1" }, "metanode": "Gene" } ] }