Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=43650

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43675",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43625",
    "results": [
        {
            "id": 43648,
            "identifier": "C0262576",
            "identifier_type": "str",
            "name": "Nerve paralysis",
            "properties": {
                "url": "http://identifiers.org/umls/C0262576",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 43649,
            "identifier": "GO:0036435",
            "identifier_type": "str",
            "name": "K48-linked polyubiquitin binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0036435",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 43650,
            "identifier": "GO:0048312",
            "identifier_type": "str",
            "name": "intracellular distribution of mitochondria",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048312",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43651,
            "identifier": "7153",
            "identifier_type": "int",
            "name": "TOP2A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7153",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "topoisomerase (DNA) II alpha 170kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 43652,
            "identifier": "DB01256",
            "identifier_type": "str",
            "name": "Retapamulin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01256",
                "inchi": "InChI=1S/C30H47NO4S/c1-7-28(4)16-24(35-25(33)17-36-22-14-20-8-9-21(15-22)31(20)6)29(5)18(2)10-12-30(19(3)27(28)34)13-11-23(32)26(29)30/h7,18-22,24,26-27,34H,1,8-17H2,2-6H3/t18-,19+,20-,21+,22?,24-,26+,27+,28-,29+,30+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=STZYTFJPGGDRJD-FJJJPKKESA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 43653,
            "identifier": "105372204",
            "identifier_type": "int",
            "name": "LOC105372204",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105372204",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "uncharacterized LOC105372204"
            },
            "metanode": "Gene"
        },
        {
            "id": 43654,
            "identifier": "GO:0097016",
            "identifier_type": "str",
            "name": "L27 domain binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0097016",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 43655,
            "identifier": "25878",
            "identifier_type": "int",
            "name": "MXRA5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/25878",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "matrix-remodelling associated 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 43656,
            "identifier": "1857",
            "identifier_type": "int",
            "name": "DVL3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1857",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "dishevelled segment polarity protein 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 43657,
            "identifier": "GO:1901873",
            "identifier_type": "str",
            "name": "regulation of post-translational protein modification",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901873",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43658,
            "identifier": "GO:0052055",
            "identifier_type": "str",
            "name": "modulation by symbiont of host molecular function",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052055",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43659,
            "identifier": "GO:0006613",
            "identifier_type": "str",
            "name": "cotranslational protein targeting to membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006613",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43660,
            "identifier": "79081",
            "identifier_type": "int",
            "name": "LBHD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79081",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "LBH domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 43661,
            "identifier": "GO:1903026",
            "identifier_type": "str",
            "name": "negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903026",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43662,
            "identifier": "C0267994",
            "identifier_type": "str",
            "name": "Disorders of fluid, electrolyte and acid-base balance",
            "properties": {
                "url": "http://identifiers.org/umls/C0267994",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 43663,
            "identifier": "230",
            "identifier_type": "int",
            "name": "ALDOC",
            "properties": {
                "url": "http://identifiers.org/ncbigene/230",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "aldolase C, fructose-bisphosphate"
            },
            "metanode": "Gene"
        },
        {
            "id": 43664,
            "identifier": "8721",
            "identifier_type": "int",
            "name": "EDF1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8721",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "endothelial differentiation-related factor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 43665,
            "identifier": "DB01259",
            "identifier_type": "str",
            "name": "Lapatinib",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01259",
                "inchi": "InChI=1S/C29H26ClFN4O4S/c1-40(36,37)12-11-32-16-23-7-10-27(39-23)20-5-8-26-24(14-20)29(34-18-33-26)35-22-6-9-28(25(30)15-22)38-17-19-3-2-4-21(31)13-19/h2-10,13-15,18,32H,11-12,16-17H2,1H3,(H,33,34,35)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BCFGMOOMADDAQU-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 43666,
            "identifier": "GO:1903070",
            "identifier_type": "str",
            "name": "negative regulation of ER-associated ubiquitin-dependent protein catabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903070",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 43667,
            "identifier": "122809",
            "identifier_type": "int",
            "name": "SOCS4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/122809",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "suppressor of cytokine signaling 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 43668,
            "identifier": "284309",
            "identifier_type": "int",
            "name": "ZNF776",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284309",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 776"
            },
            "metanode": "Gene"
        },
        {
            "id": 43669,
            "identifier": "2683",
            "identifier_type": "int",
            "name": "B4GALT1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2683",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 43670,
            "identifier": "11190",
            "identifier_type": "int",
            "name": "CEP250",
            "properties": {
                "url": "http://identifiers.org/ncbigene/11190",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "centrosomal protein 250kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 43671,
            "identifier": "51284",
            "identifier_type": "int",
            "name": "TLR7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51284",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "toll-like receptor 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 43672,
            "identifier": "91752",
            "identifier_type": "int",
            "name": "ZNF804A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/91752",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "zinc finger protein 804A"
            },
            "metanode": "Gene"
        }
    ]
}