Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=43750
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43775", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43725", "results": [ { "id": 43748, "identifier": "PC7_2956", "identifier_type": "str", "name": "DNA strand elongation", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 43749, "identifier": "7174", "identifier_type": "int", "name": "TPP2", "properties": { "url": "http://identifiers.org/ncbigene/7174", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "tripeptidyl peptidase II" }, "metanode": "Gene" }, { "id": 43750, "identifier": "9379", "identifier_type": "int", "name": "NRXN2", "properties": { "url": "http://identifiers.org/ncbigene/9379", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "neurexin 2" }, "metanode": "Gene" }, { "id": 43751, "identifier": "C2747813", "identifier_type": "str", "name": "Bacterial colonisation", "properties": { "url": "http://identifiers.org/umls/C2747813", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43752, "identifier": "GO:0032410", "identifier_type": "str", "name": "negative regulation of transporter activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032410", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43753, "identifier": "C0014742", "identifier_type": "str", "name": "Erythema multiforme", "properties": { "url": "http://identifiers.org/umls/C0014742", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43754, "identifier": "26011", "identifier_type": "int", "name": "TENM4", "properties": { "url": "http://identifiers.org/ncbigene/26011", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "teneurin transmembrane protein 4" }, "metanode": "Gene" }, { "id": 43755, "identifier": "2006", "identifier_type": "int", "name": "ELN", "properties": { "url": "http://identifiers.org/ncbigene/2006", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "elastin" }, "metanode": "Gene" }, { "id": 43756, "identifier": "55553", "identifier_type": "int", "name": "SOX6", "properties": { "url": "http://identifiers.org/ncbigene/55553", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "SRY (sex determining region Y)-box 6" }, "metanode": "Gene" }, { "id": 43757, "identifier": "GO:0009310", "identifier_type": "str", "name": "amine catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009310", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43758, "identifier": "79230", "identifier_type": "int", "name": "ZNF557", "properties": { "url": "http://identifiers.org/ncbigene/79230", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 557" }, "metanode": "Gene" }, { "id": 43759, "identifier": "23551", "identifier_type": "int", "name": "RASD2", "properties": { "url": "http://identifiers.org/ncbigene/23551", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "RASD family, member 2" }, "metanode": "Gene" }, { "id": 43760, "identifier": "363", "identifier_type": "int", "name": "AQP6", "properties": { "url": "http://identifiers.org/ncbigene/363", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "aquaporin 6, kidney specific" }, "metanode": "Gene" }, { "id": 43761, "identifier": "8870", "identifier_type": "int", "name": "IER3", "properties": { "url": "http://identifiers.org/ncbigene/8870", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "immediate early response 3" }, "metanode": "Gene" }, { "id": 43762, "identifier": "492307", "identifier_type": "int", "name": "C8orf22", "properties": { "url": "http://identifiers.org/ncbigene/492307", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "chromosome 8 open reading frame 22" }, "metanode": "Gene" }, { "id": 43763, "identifier": "81555", "identifier_type": "int", "name": "YIPF5", "properties": { "url": "http://identifiers.org/ncbigene/81555", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "Yip1 domain family, member 5" }, "metanode": "Gene" }, { "id": 43764, "identifier": "GO:0002361", "identifier_type": "str", "name": "CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002361", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43765, "identifier": "2688", "identifier_type": "int", "name": "GH1", "properties": { "url": "http://identifiers.org/ncbigene/2688", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "growth hormone 1" }, "metanode": "Gene" }, { "id": 43766, "identifier": "C1145628", "identifier_type": "str", "name": "Unspecified disorder of autonomic nervous system", "properties": { "url": "http://identifiers.org/umls/C1145628", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43767, "identifier": "GO:0060478", "identifier_type": "str", "name": "acrosomal vesicle exocytosis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060478", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43768, "identifier": "6196", "identifier_type": "int", "name": "RPS6KA2", "properties": { "url": "http://identifiers.org/ncbigene/6196", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "ribosomal protein S6 kinase, 90kDa, polypeptide 2" }, "metanode": "Gene" }, { "id": 43769, "identifier": "79912", "identifier_type": "int", "name": "PYROXD1", "properties": { "url": "http://identifiers.org/ncbigene/79912", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "pyridine nucleotide-disulphide oxidoreductase domain 1" }, "metanode": "Gene" }, { "id": 43770, "identifier": "N0000007620", "identifier_type": "str", "name": "Ergot Alkaloids", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000007620", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Chemical/Ingredient" }, "metanode": "Pharmacologic Class" }, { "id": 43771, "identifier": "5157", "identifier_type": "int", "name": "PDGFRL", "properties": { "url": "http://identifiers.org/ncbigene/5157", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "platelet-derived growth factor receptor-like" }, "metanode": "Gene" }, { "id": 43772, "identifier": "55179", "identifier_type": "int", "name": "FAIM", "properties": { "url": "http://identifiers.org/ncbigene/55179", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "Fas apoptotic inhibitory molecule" }, "metanode": "Gene" } ] }