Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=43925
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43950", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=43900", "results": [ { "id": 43922, "identifier": "C0006846", "identifier_type": "str", "name": "Skin candida", "properties": { "url": "http://identifiers.org/umls/C0006846", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 43923, "identifier": "10501", "identifier_type": "int", "name": "SEMA6B", "properties": { "url": "http://identifiers.org/ncbigene/10501", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B" }, "metanode": "Gene" }, { "id": 43924, "identifier": "GO:0002139", "identifier_type": "str", "name": "stereocilia coupling link", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002139", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 43925, "identifier": "GO:0035513", "identifier_type": "str", "name": "oxidative RNA demethylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035513", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43926, "identifier": "1384", "identifier_type": "int", "name": "CRAT", "properties": { "url": "http://identifiers.org/ncbigene/1384", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "carnitine O-acetyltransferase" }, "metanode": "Gene" }, { "id": 43927, "identifier": "9891", "identifier_type": "int", "name": "NUAK1", "properties": { "url": "http://identifiers.org/ncbigene/9891", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "NUAK family, SNF1-like kinase, 1" }, "metanode": "Gene" }, { "id": 43928, "identifier": "GO:0007088", "identifier_type": "str", "name": "regulation of mitotic nuclear division", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0007088", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43929, "identifier": "GO:0032590", "identifier_type": "str", "name": "dendrite membrane", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032590", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 43930, "identifier": "GO:0008202", "identifier_type": "str", "name": "steroid metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0008202", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43931, "identifier": "3725", "identifier_type": "int", "name": "JUN", "properties": { "url": "http://identifiers.org/ncbigene/3725", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "jun proto-oncogene" }, "metanode": "Gene" }, { "id": 43932, "identifier": "GO:0048551", "identifier_type": "str", "name": "metalloenzyme inhibitor activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048551", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 43933, "identifier": "GO:0002193", "identifier_type": "str", "name": "MAML1-RBP-Jkappa- ICN1 complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002193", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 43934, "identifier": "PC7_6592", "identifier_type": "str", "name": "Processing of DNA ends prior to end rejoining", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 43935, "identifier": "PC7_3806", "identifier_type": "str", "name": "FCERI mediated MAPK activation", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 43938, "identifier": "10845", "identifier_type": "int", "name": "CLPX", "properties": { "url": "http://identifiers.org/ncbigene/10845", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "caseinolytic mitochondrial matrix peptidase chaperone subunit" }, "metanode": "Gene" }, { "id": 43939, "identifier": "692094", "identifier_type": "int", "name": "MSMP", "properties": { "url": "http://identifiers.org/ncbigene/692094", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "microseminoprotein, prostate associated" }, "metanode": "Gene" }, { "id": 43940, "identifier": "DB00856", "identifier_type": "str", "name": "Chlorphenesin", "properties": { "url": "http://www.drugbank.ca/drugs/DB00856", "inchi": "InChI=1S/C9H11ClO3/c10-7-1-3-9(4-2-7)13-6-8(12)5-11/h1-4,8,11-12H,5-6H2", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=MXOAEAUPQDYUQM-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 43941, "identifier": "GO:0046943", "identifier_type": "str", "name": "carboxylic acid transmembrane transporter activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046943", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 43942, "identifier": "GO:0070254", "identifier_type": "str", "name": "mucus secretion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070254", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43943, "identifier": "GO:0004046", "identifier_type": "str", "name": "aminoacylase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004046", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 43944, "identifier": "GO:0001632", "identifier_type": "str", "name": "leukotriene B4 receptor activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0001632", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 43945, "identifier": "GO:0045862", "identifier_type": "str", "name": "positive regulation of proteolysis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045862", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 43946, "identifier": "255104", "identifier_type": "int", "name": "TMCO4", "properties": { "url": "http://identifiers.org/ncbigene/255104", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "transmembrane and coiled-coil domains 4" }, "metanode": "Gene" }, { "id": 43947, "identifier": "7132", "identifier_type": "int", "name": "TNFRSF1A", "properties": { "url": "http://identifiers.org/ncbigene/7132", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "tumor necrosis factor receptor superfamily, member 1A" }, "metanode": "Gene" }, { "id": 43948, "identifier": "57154", "identifier_type": "int", "name": "SMURF1", "properties": { "url": "http://identifiers.org/ncbigene/57154", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "SMAD specific E3 ubiquitin protein ligase 1" }, "metanode": "Gene" } ] }