Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=44250

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44275",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44225",
    "results": [
        {
            "id": 44250,
            "identifier": "GO:0003015",
            "identifier_type": "str",
            "name": "heart process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0003015",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44251,
            "identifier": "6531",
            "identifier_type": "int",
            "name": "SLC6A3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6531",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "solute carrier family 6 (neurotransmitter transporter), member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 44252,
            "identifier": "C0235710",
            "identifier_type": "str",
            "name": "Chest discomfort",
            "properties": {
                "url": "http://identifiers.org/umls/C0235710",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 44253,
            "identifier": "56681",
            "identifier_type": "int",
            "name": "SAR1A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56681",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "secretion associated, Ras related GTPase 1A"
            },
            "metanode": "Gene"
        },
        {
            "id": 44254,
            "identifier": "GO:0061218",
            "identifier_type": "str",
            "name": "negative regulation of mesonephros development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061218",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44255,
            "identifier": "102725104",
            "identifier_type": "int",
            "name": "LOC102725104",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102725104",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "coiled-coil domain-containing protein 29-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 44256,
            "identifier": "GO:0090534",
            "identifier_type": "str",
            "name": "calcium ion-transporting ATPase complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090534",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 44257,
            "identifier": "GO:0005094",
            "identifier_type": "str",
            "name": "Rho GDP-dissociation inhibitor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005094",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 44258,
            "identifier": "147949",
            "identifier_type": "int",
            "name": "ZNF583",
            "properties": {
                "url": "http://identifiers.org/ncbigene/147949",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 583"
            },
            "metanode": "Gene"
        },
        {
            "id": 44259,
            "identifier": "C0005716",
            "identifier_type": "str",
            "name": "Blastomycosis",
            "properties": {
                "url": "http://identifiers.org/umls/C0005716",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 44260,
            "identifier": "1363",
            "identifier_type": "int",
            "name": "CPE",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1363",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "carboxypeptidase E"
            },
            "metanode": "Gene"
        },
        {
            "id": 44261,
            "identifier": "9870",
            "identifier_type": "int",
            "name": "AREL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9870",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "apoptosis resistant E3 ubiquitin protein ligase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 44262,
            "identifier": "DB01254",
            "identifier_type": "str",
            "name": "Dasatinib",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01254",
                "inchi": "InChI=1S/C22H26ClN7O2S/c1-14-4-3-5-16(23)20(14)28-21(32)17-13-24-22(33-17)27-18-12-19(26-15(2)25-18)30-8-6-29(7-9-30)10-11-31/h3-5,12-13,31H,6-11H2,1-2H3,(H,28,32)(H,24,25,26,27)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ZBNZXTGUTAYRHI-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 44263,
            "identifier": "PC7_3017",
            "identifier_type": "str",
            "name": "Defective AMN causes hereditary megaloblastic anemia 1",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 44264,
            "identifier": "105379425",
            "identifier_type": "int",
            "name": "LOC105379425",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105379425",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "ankyrin repeat domain-containing protein 20A2-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 44265,
            "identifier": "150274",
            "identifier_type": "int",
            "name": "HSCB",
            "properties": {
                "url": "http://identifiers.org/ncbigene/150274",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "HscB mitochondrial iron-sulfur cluster co-chaperone"
            },
            "metanode": "Gene"
        },
        {
            "id": 44266,
            "identifier": "GO:0006732",
            "identifier_type": "str",
            "name": "coenzyme metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006732",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44267,
            "identifier": "3816",
            "identifier_type": "int",
            "name": "KLK1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3816",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "kallikrein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 44268,
            "identifier": "8227",
            "identifier_type": "int",
            "name": "AKAP17A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8227",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X|Y",
                "description": "A kinase (PRKA) anchor protein 17A"
            },
            "metanode": "Gene"
        },
        {
            "id": 44269,
            "identifier": "GO:0010034",
            "identifier_type": "str",
            "name": "response to acetate",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010034",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44270,
            "identifier": "PC7_8057",
            "identifier_type": "str",
            "name": "TRAF6 mediated NF-kB activation",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 44271,
            "identifier": "GO:0038092",
            "identifier_type": "str",
            "name": "nodal signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0038092",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44272,
            "identifier": "C0022667",
            "identifier_type": "str",
            "name": "Renal papillary necrosis",
            "properties": {
                "url": "http://identifiers.org/umls/C0022667",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 44273,
            "identifier": "C0152219",
            "identifier_type": "str",
            "name": "Cyclophoria",
            "properties": {
                "url": "http://identifiers.org/umls/C0152219",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 44274,
            "identifier": "81691",
            "identifier_type": "int",
            "name": "LOC81691",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81691",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "exonuclease NEF-sp"
            },
            "metanode": "Gene"
        }
    ]
}