Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=44425
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44450", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44400", "results": [ { "id": 44425, "identifier": "GO:1903844", "identifier_type": "str", "name": "regulation of cellular response to transforming growth factor beta stimulus", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903844", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44426, "identifier": "55249", "identifier_type": "int", "name": "YY1AP1", "properties": { "url": "http://identifiers.org/ncbigene/55249", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "YY1 associated protein 1" }, "metanode": "Gene" }, { "id": 44427, "identifier": "GO:0002505", "identifier_type": "str", "name": "antigen processing and presentation of polysaccharide antigen via MHC class II", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002505", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44428, "identifier": "C0947912", "identifier_type": "str", "name": "Myasthenia", "properties": { "url": "http://identifiers.org/umls/C0947912", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 44429, "identifier": "GO:0019145", "identifier_type": "str", "name": "aminobutyraldehyde dehydrogenase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019145", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 44430, "identifier": "768239", "identifier_type": "int", "name": "PSAPL1", "properties": { "url": "http://identifiers.org/ncbigene/768239", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "prosaposin-like 1 (gene/pseudogene)" }, "metanode": "Gene" }, { "id": 44431, "identifier": "23066", "identifier_type": "int", "name": "CAND2", "properties": { "url": "http://identifiers.org/ncbigene/23066", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "cullin-associated and neddylation-dissociated 2 (putative)" }, "metanode": "Gene" }, { "id": 44432, "identifier": "7552", "identifier_type": "int", "name": "ZNF711", "properties": { "url": "http://identifiers.org/ncbigene/7552", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "zinc finger protein 711" }, "metanode": "Gene" }, { "id": 44433, "identifier": "C0007115", "identifier_type": "str", "name": "Thyroid cancer", "properties": { "url": "http://identifiers.org/umls/C0007115", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 44434, "identifier": "84034", "identifier_type": "int", "name": "EMILIN2", "properties": { "url": "http://identifiers.org/ncbigene/84034", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "elastin microfibril interfacer 2" }, "metanode": "Gene" }, { "id": 44435, "identifier": "GO:0032261", "identifier_type": "str", "name": "purine nucleotide salvage", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032261", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44436, "identifier": "GO:0003938", "identifier_type": "str", "name": "IMP dehydrogenase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0003938", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 44437, "identifier": "118430", "identifier_type": "int", "name": "MUCL1", "properties": { "url": "http://identifiers.org/ncbigene/118430", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "mucin-like 1" }, "metanode": "Gene" }, { "id": 44438, "identifier": "GO:1901529", "identifier_type": "str", "name": "positive regulation of anion channel activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1901529", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44439, "identifier": "GO:1904353", "identifier_type": "str", "name": "regulation of telomere capping", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1904353", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44440, "identifier": "GO:0097648", "identifier_type": "str", "name": "G-protein coupled receptor complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0097648", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 44441, "identifier": "64710", "identifier_type": "int", "name": "NUCKS1", "properties": { "url": "http://identifiers.org/ncbigene/64710", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "nuclear casein kinase and cyclin-dependent kinase substrate 1" }, "metanode": "Gene" }, { "id": 44442, "identifier": "WP75_r83867", "identifier_type": "str", "name": "Toll-like Receptor Signaling Pathway", "properties": { "url": "http://www.wikipathways.org/instance/WP75_r83867", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 44443, "identifier": "79608", "identifier_type": "int", "name": "RIC3", "properties": { "url": "http://identifiers.org/ncbigene/79608", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "RIC3 acetylcholine receptor chaperone" }, "metanode": "Gene" }, { "id": 44444, "identifier": "387694", "identifier_type": "int", "name": "SH2D4B", "properties": { "url": "http://identifiers.org/ncbigene/387694", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "SH2 domain containing 4B" }, "metanode": "Gene" }, { "id": 44445, "identifier": "757", "identifier_type": "int", "name": "TMEM50B", "properties": { "url": "http://identifiers.org/ncbigene/757", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "21", "description": "transmembrane protein 50B" }, "metanode": "Gene" }, { "id": 44446, "identifier": "9248", "identifier_type": "int", "name": "GPR50", "properties": { "url": "http://identifiers.org/ncbigene/9248", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "G protein-coupled receptor 50" }, "metanode": "Gene" }, { "id": 44447, "identifier": "59286", "identifier_type": "int", "name": "UBL5", "properties": { "url": "http://identifiers.org/ncbigene/59286", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "ubiquitin-like 5" }, "metanode": "Gene" }, { "id": 44448, "identifier": "GO:0032776", "identifier_type": "str", "name": "DNA methylation on cytosine", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032776", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44449, "identifier": "GO:0045665", "identifier_type": "str", "name": "negative regulation of neuron differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045665", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }