Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=44500

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44525",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44475",
    "results": [
        {
            "id": 44500,
            "identifier": "148103",
            "identifier_type": "int",
            "name": "ZNF599",
            "properties": {
                "url": "http://identifiers.org/ncbigene/148103",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 599"
            },
            "metanode": "Gene"
        },
        {
            "id": 44501,
            "identifier": "1645",
            "identifier_type": "int",
            "name": "AKR1C1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1645",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "aldo-keto reductase family 1, member C1"
            },
            "metanode": "Gene"
        },
        {
            "id": 44502,
            "identifier": "10136",
            "identifier_type": "int",
            "name": "CELA3A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10136",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "chymotrypsin-like elastase family, member 3A"
            },
            "metanode": "Gene"
        },
        {
            "id": 44503,
            "identifier": "C0520729",
            "identifier_type": "str",
            "name": "Subconjunctival cyst",
            "properties": {
                "url": "http://identifiers.org/umls/C0520729",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 44504,
            "identifier": "102723631",
            "identifier_type": "int",
            "name": "CT45A10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102723631",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "cancer/testis antigen family 45, member A10"
            },
            "metanode": "Gene"
        },
        {
            "id": 44505,
            "identifier": "105379707",
            "identifier_type": "int",
            "name": "LOC105379707",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105379707",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "uncharacterized LOC105379707"
            },
            "metanode": "Gene"
        },
        {
            "id": 44506,
            "identifier": "8509",
            "identifier_type": "int",
            "name": "NDST2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8509",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 44507,
            "identifier": "58531",
            "identifier_type": "int",
            "name": "PRM3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/58531",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "protamine 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 44508,
            "identifier": "GO:0009141",
            "identifier_type": "str",
            "name": "nucleoside triphosphate metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009141",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44509,
            "identifier": "DB00221",
            "identifier_type": "str",
            "name": "Isoetarine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00221",
                "inchi": "InChI=1S/C13H21NO3/c1-4-10(14-8(2)3)13(17)9-5-6-11(15)12(16)7-9/h5-8,10,13-17H,4H2,1-3H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=HUYWAWARQUIQLE-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 44510,
            "identifier": "GO:0005346",
            "identifier_type": "str",
            "name": "purine ribonucleotide transmembrane transporter activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005346",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 44511,
            "identifier": "GO:0043305",
            "identifier_type": "str",
            "name": "negative regulation of mast cell degranulation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043305",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44512,
            "identifier": "GO:0000472",
            "identifier_type": "str",
            "name": "endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000472",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44513,
            "identifier": "PC7_3425",
            "identifier_type": "str",
            "name": "ER Quality Control Compartment (ERQC)",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 44514,
            "identifier": "GO:0015824",
            "identifier_type": "str",
            "name": "proline transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015824",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44515,
            "identifier": "222484",
            "identifier_type": "int",
            "name": "LNX2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/222484",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "ligand of numb-protein X 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 44516,
            "identifier": "GO:0051832",
            "identifier_type": "str",
            "name": "avoidance of defenses of other organism involved in symbiotic interaction",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051832",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44517,
            "identifier": "GO:1900372",
            "identifier_type": "str",
            "name": "negative regulation of purine nucleotide biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1900372",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44518,
            "identifier": "100129775",
            "identifier_type": "int",
            "name": "LOC100129775",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100129775",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "uncharacterized LOC100129775"
            },
            "metanode": "Gene"
        },
        {
            "id": 44519,
            "identifier": "4796",
            "identifier_type": "int",
            "name": "TONSL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4796",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "tonsoku-like, DNA repair protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 44520,
            "identifier": "101928318",
            "identifier_type": "int",
            "name": "LOC101928318",
            "properties": {
                "url": "http://identifiers.org/ncbigene/101928318",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "Un",
                "description": "nucleolar protein 58-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 44521,
            "identifier": "105375109",
            "identifier_type": "int",
            "name": "LOC105375109",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105375109",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "skin secretory protein xP2-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 44522,
            "identifier": "22891",
            "identifier_type": "int",
            "name": "ZNF365",
            "properties": {
                "url": "http://identifiers.org/ncbigene/22891",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "zinc finger protein 365"
            },
            "metanode": "Gene"
        },
        {
            "id": 44523,
            "identifier": "D006939",
            "identifier_type": "str",
            "name": "Hyperemesis Gravidarum",
            "properties": {
                "url": "http://identifiers.org/mesh/D006939",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 44524,
            "identifier": "GO:0045830",
            "identifier_type": "str",
            "name": "positive regulation of isotype switching",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045830",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}