Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=44675
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44700", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44650", "results": [ { "id": 44674, "identifier": "PC7_6914", "identifier_type": "str", "name": "Regulation of nuclear beta catenin signaling and target gene transcription", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 44675, "identifier": "83942", "identifier_type": "int", "name": "TSSK1B", "properties": { "url": "http://identifiers.org/ncbigene/83942", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "testis-specific serine kinase 1B" }, "metanode": "Gene" }, { "id": 44676, "identifier": "GO:0051029", "identifier_type": "str", "name": "rRNA transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051029", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44677, "identifier": "653619", "identifier_type": "int", "name": "PRAMEF15", "properties": { "url": "http://identifiers.org/ncbigene/653619", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "PRAME family member 15" }, "metanode": "Gene" }, { "id": 44678, "identifier": "GO:0002666", "identifier_type": "str", "name": "positive regulation of T cell tolerance induction", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002666", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44679, "identifier": "GO:0033194", "identifier_type": "str", "name": "response to hydroperoxide", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033194", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44680, "identifier": "C0009450", "identifier_type": "str", "name": "Infection", "properties": { "url": "http://identifiers.org/umls/C0009450", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 44681, "identifier": "29966", "identifier_type": "int", "name": "STRN3", "properties": { "url": "http://identifiers.org/ncbigene/29966", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "striatin, calmodulin binding protein 3" }, "metanode": "Gene" }, { "id": 44682, "identifier": "5817", "identifier_type": "int", "name": "PVR", "properties": { "url": "http://identifiers.org/ncbigene/5817", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "poliovirus receptor" }, "metanode": "Gene" }, { "id": 44683, "identifier": "10484", "identifier_type": "int", "name": "SEC23A", "properties": { "url": "http://identifiers.org/ncbigene/10484", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "Sec23 homolog A (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 44684, "identifier": "51759", "identifier_type": "int", "name": "C9orf78", "properties": { "url": "http://identifiers.org/ncbigene/51759", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "chromosome 9 open reading frame 78" }, "metanode": "Gene" }, { "id": 44685, "identifier": "60506", "identifier_type": "int", "name": "NYX", "properties": { "url": "http://identifiers.org/ncbigene/60506", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "nyctalopin" }, "metanode": "Gene" }, { "id": 44686, "identifier": "GO:0044843", "identifier_type": "str", "name": "cell cycle G1/S phase transition", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0044843", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44687, "identifier": "90806", "identifier_type": "int", "name": "ANGEL2", "properties": { "url": "http://identifiers.org/ncbigene/90806", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "angel homolog 2 (Drosophila)" }, "metanode": "Gene" }, { "id": 44688, "identifier": "100137047", "identifier_type": "int", "name": "JMJD7", "properties": { "url": "http://identifiers.org/ncbigene/100137047", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "jumonji domain containing 7" }, "metanode": "Gene" }, { "id": 44689, "identifier": "GO:0009196", "identifier_type": "str", "name": "pyrimidine deoxyribonucleoside diphosphate metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009196", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44690, "identifier": "4318", "identifier_type": "int", "name": "MMP9", "properties": { "url": "http://identifiers.org/ncbigene/4318", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "matrix metallopeptidase 9" }, "metanode": "Gene" }, { "id": 44691, "identifier": "C0002994", "identifier_type": "str", "name": "Angioedema", "properties": { "url": "http://identifiers.org/umls/C0002994", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 44692, "identifier": "84624", "identifier_type": "int", "name": "FNDC1", "properties": { "url": "http://identifiers.org/ncbigene/84624", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "fibronectin type III domain containing 1" }, "metanode": "Gene" }, { "id": 44693, "identifier": "GO:0009041", "identifier_type": "str", "name": "uridylate kinase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009041", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 44694, "identifier": "C1698976", "identifier_type": "str", "name": "Infusion site urticaria", "properties": { "url": "http://identifiers.org/umls/C1698976", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 44695, "identifier": "WP107_r78489", "identifier_type": "str", "name": "Translation Factors", "properties": { "url": "http://www.wikipathways.org/instance/WP107_r78489", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 44696, "identifier": "388284", "identifier_type": "int", "name": "C16orf86", "properties": { "url": "http://identifiers.org/ncbigene/388284", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "chromosome 16 open reading frame 86" }, "metanode": "Gene" }, { "id": 44697, "identifier": "391003", "identifier_type": "int", "name": "LOC391003", "properties": { "url": "http://identifiers.org/ncbigene/391003", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "PRAME family member-like" }, "metanode": "Gene" }, { "id": 44698, "identifier": "1475", "identifier_type": "int", "name": "CSTA", "properties": { "url": "http://identifiers.org/ncbigene/1475", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "cystatin A (stefin A)" }, "metanode": "Gene" } ] }