Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=44875
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44900", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44850", "results": [ { "id": 44875, "identifier": "26517", "identifier_type": "int", "name": "TIMM13", "properties": { "url": "http://identifiers.org/ncbigene/26517", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "translocase of inner mitochondrial membrane 13 homolog (yeast)" }, "metanode": "Gene" }, { "id": 44876, "identifier": "GO:1900218", "identifier_type": "str", "name": "negative regulation of apoptotic process involved in metanephric nephron tubule development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1900218", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44877, "identifier": "PC7_8786", "identifier_type": "str", "name": "XBP1(S) activates chaperone genes", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 44878, "identifier": "100996413", "identifier_type": "int", "name": "LOC100996413", "properties": { "url": "http://identifiers.org/ncbigene/100996413", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "uncharacterized LOC100996413" }, "metanode": "Gene" }, { "id": 44879, "identifier": "79720", "identifier_type": "int", "name": "VPS37B", "properties": { "url": "http://identifiers.org/ncbigene/79720", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "vacuolar protein sorting 37 homolog B (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 44880, "identifier": "WP2018_r79959", "identifier_type": "str", "name": "RANKL/RANK Signaling Pathway", "properties": { "url": "http://www.wikipathways.org/instance/WP2018_r79959", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 44881, "identifier": "869", "identifier_type": "int", "name": "CBLN1", "properties": { "url": "http://identifiers.org/ncbigene/869", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "cerebellin 1 precursor" }, "metanode": "Gene" }, { "id": 44882, "identifier": "140432", "identifier_type": "int", "name": "RNF113B", "properties": { "url": "http://identifiers.org/ncbigene/140432", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "ring finger protein 113B" }, "metanode": "Gene" }, { "id": 44883, "identifier": "150737", "identifier_type": "int", "name": "TTC30B", "properties": { "url": "http://identifiers.org/ncbigene/150737", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "tetratricopeptide repeat domain 30B" }, "metanode": "Gene" }, { "id": 44884, "identifier": "2805", "identifier_type": "int", "name": "GOT1", "properties": { "url": "http://identifiers.org/ncbigene/2805", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "glutamic-oxaloacetic transaminase 1, soluble" }, "metanode": "Gene" }, { "id": 44885, "identifier": "GO:0071159", "identifier_type": "str", "name": "NF-kappaB complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071159", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 44886, "identifier": "5188", "identifier_type": "int", "name": "GATB", "properties": { "url": "http://identifiers.org/ncbigene/5188", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "glutamyl-tRNA(Gln) amidotransferase, subunit B" }, "metanode": "Gene" }, { "id": 44887, "identifier": "504190", "identifier_type": "int", "name": "OR8U9", "properties": { "url": "http://identifiers.org/ncbigene/504190", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "olfactory receptor, family 8, subfamily U, member 9" }, "metanode": "Gene" }, { "id": 44888, "identifier": "29924", "identifier_type": "int", "name": "EPN1", "properties": { "url": "http://identifiers.org/ncbigene/29924", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "epsin 1" }, "metanode": "Gene" }, { "id": 44889, "identifier": "5663", "identifier_type": "int", "name": "PSEN1", "properties": { "url": "http://identifiers.org/ncbigene/5663", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "presenilin 1" }, "metanode": "Gene" }, { "id": 44890, "identifier": "10314", "identifier_type": "int", "name": "LANCL1", "properties": { "url": "http://identifiers.org/ncbigene/10314", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "LanC lantibiotic synthetase component C-like 1 (bacterial)" }, "metanode": "Gene" }, { "id": 44891, "identifier": "C0277585", "identifier_type": "str", "name": "Drug intolerance", "properties": { "url": "http://identifiers.org/umls/C0277585", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 44892, "identifier": "7443", "identifier_type": "int", "name": "VRK1", "properties": { "url": "http://identifiers.org/ncbigene/7443", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "vaccinia related kinase 1" }, "metanode": "Gene" }, { "id": 44893, "identifier": "387715", "identifier_type": "int", "name": "ARMS2", "properties": { "url": "http://identifiers.org/ncbigene/387715", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "age-related maculopathy susceptibility 2" }, "metanode": "Gene" }, { "id": 44894, "identifier": "DOID:1993", "identifier_type": "str", "name": "rectum cancer", "properties": { "url": "http://purl.obolibrary.org/obo/DOID_1993", "source": "Disease Ontology", "license": "CC BY 3.0" }, "metanode": "Disease" }, { "id": 44895, "identifier": "GO:1900190", "identifier_type": "str", "name": "regulation of single-species biofilm formation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1900190", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44896, "identifier": "GO:0042891", "identifier_type": "str", "name": "antibiotic transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042891", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44897, "identifier": "GO:0016925", "identifier_type": "str", "name": "protein sumoylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016925", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44898, "identifier": "C1535970", "identifier_type": "str", "name": "Blood count abnormal", "properties": { "url": "http://identifiers.org/umls/C1535970", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 44899, "identifier": "DB06590", "identifier_type": "str", "name": "Ceftaroline fosamil", "properties": { "url": "http://www.drugbank.ca/drugs/DB06590", "inchi": "InChI=1S/C22H21N8O8PS4/c1-3-38-26-13(16-25-21(43-28-16)27-39(35,36)37)17(31)24-14-18(32)30-15(20(33)34)12(9-40-19(14)30)42-22-23-11(8-41-22)10-4-6-29(2)7-5-10/h4-8,14,19H,3,9H2,1-2H3,(H4-,24,25,27,28,31,33,34,35,36,37)/b26-13+/t14-,19-/m1/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=ZCCUWMICIWSJIX-XHNDKCDBSA-N" }, "metanode": "Compound" } ] }