Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=44950

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44975",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44925",
    "results": [
        {
            "id": 44950,
            "identifier": "55634",
            "identifier_type": "int",
            "name": "KRBOX4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55634",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "KRAB box domain containing 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 44951,
            "identifier": "386677",
            "identifier_type": "int",
            "name": "KRTAP10-1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/386677",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "keratin associated protein 10-1"
            },
            "metanode": "Gene"
        },
        {
            "id": 44952,
            "identifier": "154075",
            "identifier_type": "int",
            "name": "SAMD3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/154075",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "sterile alpha motif domain containing 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 44953,
            "identifier": "GO:0072536",
            "identifier_type": "str",
            "name": "interleukin-23 receptor complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072536",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 44954,
            "identifier": "DB01303",
            "identifier_type": "str",
            "name": "Oxtriphylline",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01303",
                "inchi": "InChI=1S/C7H8N4O2.C5H14NO/c1-10-5-4(8-3-9-5)6(12)11(2)7(10)13;1-6(2,3)4-5-7/h3H,1-2H3,(H,8,9,12);7H,4-5H2,1-3H3/q;+1/p-1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=RLANKEDHRWMNRO-UHFFFAOYSA-M"
            },
            "metanode": "Compound"
        },
        {
            "id": 44955,
            "identifier": "GO:1904730",
            "identifier_type": "str",
            "name": "negative regulation of intestinal lipid absorption",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904730",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44956,
            "identifier": "55884",
            "identifier_type": "int",
            "name": "WSB2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55884",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "WD repeat and SOCS box containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 44957,
            "identifier": "UBERON:0001679",
            "identifier_type": "str",
            "name": "ethmoid bone",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0001679",
                "bto_id": "BTO:0004140",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D005004"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 44958,
            "identifier": "DB00203",
            "identifier_type": "str",
            "name": "Sildenafil",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00203",
                "inchi": "InChI=1S/C22H30N6O4S/c1-5-7-17-19-20(27(4)25-17)22(29)24-21(23-19)16-14-15(8-9-18(16)32-6-2)33(30,31)28-12-10-26(3)11-13-28/h8-9,14H,5-7,10-13H2,1-4H3,(H,23,24,29)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=BNRNXUUZRGQAQC-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 44959,
            "identifier": "105376047",
            "identifier_type": "int",
            "name": "LOC105376047",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105376047",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "uncharacterized LOC105376047"
            },
            "metanode": "Gene"
        },
        {
            "id": 44960,
            "identifier": "PC7_6644",
            "identifier_type": "str",
            "name": "Proton-coupled monocarboxylate transport",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 44961,
            "identifier": "GO:0033004",
            "identifier_type": "str",
            "name": "negative regulation of mast cell activation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0033004",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44962,
            "identifier": "438",
            "identifier_type": "int",
            "name": "ASMT",
            "properties": {
                "url": "http://identifiers.org/ncbigene/438",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X|Y",
                "description": "acetylserotonin O-methyltransferase"
            },
            "metanode": "Gene"
        },
        {
            "id": 44963,
            "identifier": "9185",
            "identifier_type": "int",
            "name": "REPS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9185",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "RALBP1 associated Eps domain containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 44964,
            "identifier": "GO:0004675",
            "identifier_type": "str",
            "name": "transmembrane receptor protein serine/threonine kinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004675",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 44965,
            "identifier": "GO:0048284",
            "identifier_type": "str",
            "name": "organelle fusion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0048284",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44966,
            "identifier": "105369277",
            "identifier_type": "int",
            "name": "LOC105369277",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105369277",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "transmembrane protein C16orf54"
            },
            "metanode": "Gene"
        },
        {
            "id": 44967,
            "identifier": "GO:0003998",
            "identifier_type": "str",
            "name": "acylphosphatase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0003998",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 44968,
            "identifier": "57580",
            "identifier_type": "int",
            "name": "PREX1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57580",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 44969,
            "identifier": "80243",
            "identifier_type": "int",
            "name": "PREX2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80243",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 44970,
            "identifier": "GO:0016331",
            "identifier_type": "str",
            "name": "morphogenesis of embryonic epithelium",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0016331",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44971,
            "identifier": "GO:0006183",
            "identifier_type": "str",
            "name": "GTP biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006183",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44972,
            "identifier": "GO:0035912",
            "identifier_type": "str",
            "name": "dorsal aorta morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035912",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44973,
            "identifier": "GO:1904321",
            "identifier_type": "str",
            "name": "response to forskolin",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904321",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 44974,
            "identifier": "GO:0010676",
            "identifier_type": "str",
            "name": "positive regulation of cellular carbohydrate metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0010676",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}