Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=44975
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45000", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=44950", "results": [ { "id": 44975, "identifier": "GO:0032299", "identifier_type": "str", "name": "ribonuclease H2 complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032299", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 44976, "identifier": "GO:0048026", "identifier_type": "str", "name": "positive regulation of mRNA splicing, via spliceosome", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048026", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45049, "identifier": "7058", "identifier_type": "int", "name": "THBS2", "properties": { "url": "http://identifiers.org/ncbigene/7058", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "thrombospondin 2" }, "metanode": "Gene" }, { "id": 44977, "identifier": "DB00337", "identifier_type": "str", "name": "Pimecrolimus", "properties": { "url": "http://www.drugbank.ca/drugs/DB00337", "inchi": "InChI=1S/C43H68ClNO11/c1-10-30-18-24(2)17-25(3)19-36(53-8)39-37(54-9)21-27(5)43(51,56-39)40(48)41(49)45-16-12-11-13-32(45)42(50)55-38(28(6)33(46)23-34(30)47)26(4)20-29-14-15-31(44)35(22-29)52-7/h18,20,25,27-33,35-39,46,51H,10-17,19,21-23H2,1-9H3/b24-18-,26-20+/t25-,27+,28-,29-,30+,31-,32-,33-,35+,36-,37-,38+,39+,43+/m0/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=KASDHRXLYQOAKZ-KDCWXYOMSA-N" }, "metanode": "Compound" }, { "id": 44978, "identifier": "C0549373", "identifier_type": "str", "name": "Laryngeal pain", "properties": { "url": "http://identifiers.org/umls/C0549373", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 44979, "identifier": "GO:0033598", "identifier_type": "str", "name": "mammary gland epithelial cell proliferation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033598", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44980, "identifier": "GO:0055106", "identifier_type": "str", "name": "ubiquitin-protein transferase regulator activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0055106", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 44981, "identifier": "84295", "identifier_type": "int", "name": "PHF6", "properties": { "url": "http://identifiers.org/ncbigene/84295", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "PHD finger protein 6" }, "metanode": "Gene" }, { "id": 44982, "identifier": "D052120", "identifier_type": "str", "name": "Glycogen Storage Disease Type IIb", "properties": { "url": "http://identifiers.org/mesh/D052120", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 44983, "identifier": "GO:0097411", "identifier_type": "str", "name": "hypoxia-inducible factor-1alpha signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0097411", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44984, "identifier": "GO:0006596", "identifier_type": "str", "name": "polyamine biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006596", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44985, "identifier": "6170", "identifier_type": "int", "name": "RPL39", "properties": { "url": "http://identifiers.org/ncbigene/6170", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "ribosomal protein L39" }, "metanode": "Gene" }, { "id": 44986, "identifier": "C0948818", "identifier_type": "str", "name": "Catheter site phlebitis", "properties": { "url": "http://identifiers.org/umls/C0948818", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 44987, "identifier": "GO:0006401", "identifier_type": "str", "name": "RNA catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0006401", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44988, "identifier": "GO:0090541", "identifier_type": "str", "name": "MIT domain binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0090541", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 44989, "identifier": "101929692", "identifier_type": "int", "name": "LOC101929692", "properties": { "url": "http://identifiers.org/ncbigene/101929692", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "uncharacterized LOC101929692" }, "metanode": "Gene" }, { "id": 44990, "identifier": "102724631", "identifier_type": "int", "name": "POTEB3", "properties": { "url": "http://identifiers.org/ncbigene/102724631", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "POTE ankyrin domain family, member B3" }, "metanode": "Gene" }, { "id": 44991, "identifier": "79869", "identifier_type": "int", "name": "CPSF7", "properties": { "url": "http://identifiers.org/ncbigene/79869", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "cleavage and polyadenylation specific factor 7, 59kDa" }, "metanode": "Gene" }, { "id": 44992, "identifier": "GO:0010608", "identifier_type": "str", "name": "posttranscriptional regulation of gene expression", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010608", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 44993, "identifier": "503497", "identifier_type": "int", "name": "MS4A13", "properties": { "url": "http://identifiers.org/ncbigene/503497", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "membrane-spanning 4-domains, subfamily A, member 13" }, "metanode": "Gene" }, { "id": 44994, "identifier": "1002", "identifier_type": "int", "name": "CDH4", "properties": { "url": "http://identifiers.org/ncbigene/1002", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "cadherin 4, type 1, R-cadherin (retinal)" }, "metanode": "Gene" }, { "id": 44995, "identifier": "9509", "identifier_type": "int", "name": "ADAMTS2", "properties": { "url": "http://identifiers.org/ncbigene/9509", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "ADAM metallopeptidase with thrombospondin type 1 motif, 2" }, "metanode": "Gene" }, { "id": 44996, "identifier": "GO:0002102", "identifier_type": "str", "name": "podosome", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002102", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 44997, "identifier": "PC7_8330", "identifier_type": "str", "name": "Transferrin endocytosis and recycling", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 44998, "identifier": "58495", "identifier_type": "int", "name": "OVOL2", "properties": { "url": "http://identifiers.org/ncbigene/58495", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "ovo-like zinc finger 2" }, "metanode": "Gene" } ] }