Node
Return nodes, sorted by similarity to the search term.
Use search=<str>
to search identifier
for prefix match, and name
for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value>
to set your own similarity
value in the range of (0, 1.0].
Set similarity=1.0
to exclude trigram search.
Filter for select metanodes using metanodes=<str>
, where <str>
is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D
will restrict to Compound and Disease nodes.
Set other-node=<node_id>
to return non-null values for metapath_count
.
metapath_counts
measures the number of metapaths stored in the database between the result node and other node.
If search
and other-node
and both specified, results are sorted by search similarity and results with metapath_count == 0
are returned.
If other-node
is specified but not search
, results are sorted by metapath_count
(descending) and only results with metapath_count > 0
are returned.
GET /v1/nodes/?format=api&offset=45025
http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45050", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45000", "results": [ { "id": 45024, "identifier": "C0858520", "identifier_type": "str", "name": "Serum gastrin increased", "properties": { "url": "http://identifiers.org/umls/C0858520", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45025, "identifier": "3171", "identifier_type": "int", "name": "FOXA3", "properties": { "url": "http://identifiers.org/ncbigene/3171", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "forkhead box A3" }, "metanode": "Gene" }, { "id": 45026, "identifier": "GO:0009449", "identifier_type": "str", "name": "gamma-aminobutyric acid biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009449", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45027, "identifier": "C0853595", "identifier_type": "str", "name": "Blood cholesterol abnormal", "properties": { "url": "http://identifiers.org/umls/C0853595", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45028, "identifier": "1326", "identifier_type": "int", "name": "MAP3K8", "properties": { "url": "http://identifiers.org/ncbigene/1326", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "mitogen-activated protein kinase kinase kinase 8" }, "metanode": "Gene" }, { "id": 45029, "identifier": "10073", "identifier_type": "int", "name": "SNUPN", "properties": { "url": "http://identifiers.org/ncbigene/10073", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "snurportin 1" }, "metanode": "Gene" }, { "id": 45030, "identifier": "GO:0002584", "identifier_type": "str", "name": "negative regulation of antigen processing and presentation of peptide antigen", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0002584", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45031, "identifier": "GO:0060211", "identifier_type": "str", "name": "regulation of nuclear-transcribed mRNA poly(A) tail shortening", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0060211", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45032, "identifier": "GO:1902745", "identifier_type": "str", "name": "positive regulation of lamellipodium organization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902745", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45033, "identifier": "N0000190108", "identifier_type": "str", "name": "Organic Anion Transporting Polypeptide 1B3 Inhibitors", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000190108", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Mechanism of Action" }, "metanode": "Pharmacologic Class" }, { "id": 45034, "identifier": "D020234", "identifier_type": "str", "name": "Gait Ataxia", "properties": { "url": "http://identifiers.org/mesh/D020234", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 45035, "identifier": "C0522214", "identifier_type": "str", "name": "Visual evoked potentials abnormal", "properties": { "url": "http://identifiers.org/umls/C0522214", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45036, "identifier": "8446", "identifier_type": "int", "name": "DUSP11", "properties": { "url": "http://identifiers.org/ncbigene/8446", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)" }, "metanode": "Gene" }, { "id": 45037, "identifier": "C0339434", "identifier_type": "str", "name": "Choroidal effusion", "properties": { "url": "http://identifiers.org/umls/C0339434", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45038, "identifier": "C0235763", "identifier_type": "str", "name": "Psoriasis flare-up", "properties": { "url": "http://identifiers.org/umls/C0235763", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45039, "identifier": "GO:0000041", "identifier_type": "str", "name": "transition metal ion transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0000041", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45040, "identifier": "GO:1903899", "identifier_type": "str", "name": "positive regulation of PERK-mediated unfolded protein response", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903899", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45041, "identifier": "C0042029", "identifier_type": "str", "name": "Urinary tract infection", "properties": { "url": "http://identifiers.org/umls/C0042029", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45042, "identifier": "C0235433", "identifier_type": "str", "name": "Fat tissue increased", "properties": { "url": "http://identifiers.org/umls/C0235433", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45043, "identifier": "C0034072", "identifier_type": "str", "name": "Cor pulmonale", "properties": { "url": "http://identifiers.org/umls/C0034072", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45044, "identifier": "C0030552", "identifier_type": "str", "name": "Paresis", "properties": { "url": "http://identifiers.org/umls/C0030552", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45045, "identifier": "GO:0035148", "identifier_type": "str", "name": "tube formation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035148", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45046, "identifier": "4733", "identifier_type": "int", "name": "DRG1", "properties": { "url": "http://identifiers.org/ncbigene/4733", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "developmentally regulated GTP binding protein 1" }, "metanode": "Gene" }, { "id": 45047, "identifier": "GO:0035634", "identifier_type": "str", "name": "response to stilbenoid", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0035634", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45048, "identifier": "284716", "identifier_type": "int", "name": "RIMKLA", "properties": { "url": "http://identifiers.org/ncbigene/284716", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "ribosomal modification protein rimK-like family member A" }, "metanode": "Gene" } ] }{ "count": 47031, "next": "