Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=45100

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45125",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45075",
    "results": [
        {
            "id": 45100,
            "identifier": "DB00864",
            "identifier_type": "str",
            "name": "Tacrolimus",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00864",
                "inchi": "InChI=1S/C44H69NO12/c1-10-13-31-19-25(2)18-26(3)20-37(54-8)40-38(55-9)22-28(5)44(52,57-40)41(49)42(50)45-17-12-11-14-32(45)43(51)56-39(29(6)34(47)24-35(31)48)27(4)21-30-15-16-33(46)36(23-30)53-7/h10,19,21,26,28-34,36-40,46-47,52H,1,11-18,20,22-24H2,2-9H3/b25-19+,27-21+/t26-,28+,29+,30-,31+,32-,33+,34-,36+,37-,38-,39+,40+,44+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=QJJXYPPXXYFBGM-LFZNUXCKSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 45101,
            "identifier": "GO:0030427",
            "identifier_type": "str",
            "name": "site of polarized growth",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030427",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 45102,
            "identifier": "346171",
            "identifier_type": "int",
            "name": "ZFP57",
            "properties": {
                "url": "http://identifiers.org/ncbigene/346171",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "ZFP57 zinc finger protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 45103,
            "identifier": "GO:0045360",
            "identifier_type": "str",
            "name": "regulation of interleukin-1 biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045360",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45104,
            "identifier": "54974",
            "identifier_type": "int",
            "name": "THG1L",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54974",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 45105,
            "identifier": "5621",
            "identifier_type": "int",
            "name": "PRNP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5621",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "prion protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 45106,
            "identifier": "51547",
            "identifier_type": "int",
            "name": "SIRT7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51547",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "sirtuin 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 45107,
            "identifier": "105378192",
            "identifier_type": "int",
            "name": "LOC105378192",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105378192",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "uncharacterized LOC105378192"
            },
            "metanode": "Gene"
        },
        {
            "id": 45108,
            "identifier": "GO:0002827",
            "identifier_type": "str",
            "name": "positive regulation of T-helper 1 type immune response",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002827",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45109,
            "identifier": "23460",
            "identifier_type": "int",
            "name": "ABCA6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23460",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "ATP-binding cassette, sub-family A (ABC1), member 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 45110,
            "identifier": "GO:0008026",
            "identifier_type": "str",
            "name": "ATP-dependent helicase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008026",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 45111,
            "identifier": "GO:0038110",
            "identifier_type": "str",
            "name": "interleukin-2-mediated signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0038110",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45112,
            "identifier": "92935",
            "identifier_type": "int",
            "name": "MARS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/92935",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "methionyl-tRNA synthetase 2, mitochondrial"
            },
            "metanode": "Gene"
        },
        {
            "id": 45113,
            "identifier": "GO:0045159",
            "identifier_type": "str",
            "name": "myosin II binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045159",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 45114,
            "identifier": "D017566",
            "identifier_type": "str",
            "name": "Microvascular Angina",
            "properties": {
                "url": "http://identifiers.org/mesh/D017566",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 45115,
            "identifier": "DB01413",
            "identifier_type": "str",
            "name": "Cefepime",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01413",
                "inchi": "InChI=1S/C19H24N6O5S2/c1-25(5-3-4-6-25)7-10-8-31-17-13(16(27)24(17)14(10)18(28)29)22-15(26)12(23-30-2)11-9-32-19(20)21-11/h9,13,17H,3-8H2,1-2H3,(H3-,20,21,22,26,28,29)/b23-12-/t13-,17-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=HVFLCNVBZFFHBT-ZKDACBOMSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 45116,
            "identifier": "GO:0042482",
            "identifier_type": "str",
            "name": "positive regulation of odontogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042482",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45117,
            "identifier": "GO:0032838",
            "identifier_type": "str",
            "name": "cell projection cytoplasm",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032838",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 45118,
            "identifier": "56341",
            "identifier_type": "int",
            "name": "PRMT8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56341",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "protein arginine methyltransferase 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 45119,
            "identifier": "GO:1904251",
            "identifier_type": "str",
            "name": "regulation of bile acid metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904251",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45120,
            "identifier": "N0000007632",
            "identifier_type": "str",
            "name": "Thyroxine",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000007632",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Chemical/Ingredient"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 45121,
            "identifier": "10319",
            "identifier_type": "int",
            "name": "LAMC3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10319",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "laminin, gamma 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 45122,
            "identifier": "DB00350",
            "identifier_type": "str",
            "name": "Minoxidil",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00350",
                "inchi": "InChI=1S/C9H15N5O/c10-7-6-8(12-9(11)14(7)15)13-4-2-1-3-5-13/h6H,1-5,10H2,(H2,11,12)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ZFMITUMMTDLWHR-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 45123,
            "identifier": "GO:0042730",
            "identifier_type": "str",
            "name": "fibrinolysis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0042730",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45124,
            "identifier": "C0848648",
            "identifier_type": "str",
            "name": "Fungal rash",
            "properties": {
                "url": "http://identifiers.org/umls/C0848648",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}