Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=45350
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45375", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45325", "results": [ { "id": 45348, "identifier": "203111", "identifier_type": "int", "name": "ERICH5", "properties": { "url": "http://identifiers.org/ncbigene/203111", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "glutamate-rich 5" }, "metanode": "Gene" }, { "id": 45349, "identifier": "WP2447_r84415", "identifier_type": "str", "name": "Amyotrophic lateral sclerosis (ALS)", "properties": { "url": "http://www.wikipathways.org/instance/WP2447_r84415", "source": "WikiPathways", "license": "CC BY 3.0" }, "metanode": "Pathway" }, { "id": 45350, "identifier": "DB00844", "identifier_type": "str", "name": "Nalbuphine", "properties": { "url": "http://www.drugbank.ca/drugs/DB00844", "inchi": "InChI=1S/C21H27NO4/c23-14-5-4-13-10-16-21(25)7-6-15(24)19-20(21,17(13)18(14)26-19)8-9-22(16)11-12-2-1-3-12/h4-5,12,15-16,19,23-25H,1-3,6-11H2/t15-,16+,19-,20-,21+/m0/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=NETZHAKZCGBWSS-CEDHKZHLSA-N" }, "metanode": "Compound" }, { "id": 45351, "identifier": "283417", "identifier_type": "int", "name": "DPY19L2", "properties": { "url": "http://identifiers.org/ncbigene/283417", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "dpy-19-like 2 (C. elegans)" }, "metanode": "Gene" }, { "id": 45352, "identifier": "5775", "identifier_type": "int", "name": "PTPN4", "properties": { "url": "http://identifiers.org/ncbigene/5775", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)" }, "metanode": "Gene" }, { "id": 45353, "identifier": "10298", "identifier_type": "int", "name": "PAK4", "properties": { "url": "http://identifiers.org/ncbigene/10298", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "p21 protein (Cdc42/Rac)-activated kinase 4" }, "metanode": "Gene" }, { "id": 45354, "identifier": "729408", "identifier_type": "int", "name": "GAGE2D", "properties": { "url": "http://identifiers.org/ncbigene/729408", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "G antigen 2D" }, "metanode": "Gene" }, { "id": 45355, "identifier": "PC7_3819", "identifier_type": "str", "name": "FGFR1 ligand binding and activation", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 45356, "identifier": "C0039128", "identifier_type": "str", "name": "Syphilis", "properties": { "url": "http://identifiers.org/umls/C0039128", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45357, "identifier": "GO:0007066", "identifier_type": "str", "name": "female meiosis sister chromatid cohesion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0007066", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45358, "identifier": "GO:0001942", "identifier_type": "str", "name": "hair follicle development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0001942", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45359, "identifier": "C0001125", "identifier_type": "str", "name": "Lactic acidosis", "properties": { "url": "http://identifiers.org/umls/C0001125", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45360, "identifier": "GO:2000449", "identifier_type": "str", "name": "regulation of CD8-positive, alpha-beta T cell extravasation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000449", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45361, "identifier": "GO:0045815", "identifier_type": "str", "name": "positive regulation of gene expression, epigenetic", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045815", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45362, "identifier": "DB01624", "identifier_type": "str", "name": "Zuclopenthixol", "properties": { "url": "http://www.drugbank.ca/drugs/DB01624", "inchi": "InChI=1S/C22H25ClN2OS/c23-17-7-8-22-20(16-17)18(19-4-1-2-6-21(19)27-22)5-3-9-24-10-12-25(13-11-24)14-15-26/h1-2,4-8,16,26H,3,9-15H2/b18-5-", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=WFPIAZLQTJBIFN-DVZOWYKESA-N" }, "metanode": "Compound" }, { "id": 45363, "identifier": "GO:1901031", "identifier_type": "str", "name": "regulation of response to reactive oxygen species", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1901031", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45364, "identifier": "GO:0045053", "identifier_type": "str", "name": "protein retention in Golgi apparatus", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045053", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45365, "identifier": "6585", "identifier_type": "int", "name": "SLIT1", "properties": { "url": "http://identifiers.org/ncbigene/6585", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "slit homolog 1 (Drosophila)" }, "metanode": "Gene" }, { "id": 45366, "identifier": "56623", "identifier_type": "int", "name": "INPP5E", "properties": { "url": "http://identifiers.org/ncbigene/56623", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "inositol polyphosphate-5-phosphatase, 72 kDa" }, "metanode": "Gene" }, { "id": 45367, "identifier": "203522", "identifier_type": "int", "name": "DDX26B", "properties": { "url": "http://identifiers.org/ncbigene/203522", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B" }, "metanode": "Gene" }, { "id": 45368, "identifier": "GO:0004602", "identifier_type": "str", "name": "glutathione peroxidase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004602", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 45369, "identifier": "GO:0004360", "identifier_type": "str", "name": "glutamine-fructose-6-phosphate transaminase (isomerizing) activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004360", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 45370, "identifier": "1289", "identifier_type": "int", "name": "COL5A1", "properties": { "url": "http://identifiers.org/ncbigene/1289", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "collagen, type V, alpha 1" }, "metanode": "Gene" }, { "id": 45371, "identifier": "10052", "identifier_type": "int", "name": "GJC1", "properties": { "url": "http://identifiers.org/ncbigene/10052", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "gap junction protein, gamma 1, 45kDa" }, "metanode": "Gene" }, { "id": 45372, "identifier": "GO:0015038", "identifier_type": "str", "name": "glutathione disulfide oxidoreductase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015038", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" } ] }