Node
Return nodes, sorted by similarity to the search term.
Use search=<str>
to search identifier
for prefix match, and name
for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value>
to set your own similarity
value in the range of (0, 1.0].
Set similarity=1.0
to exclude trigram search.
Filter for select metanodes using metanodes=<str>
, where <str>
is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D
will restrict to Compound and Disease nodes.
Set other-node=<node_id>
to return non-null values for metapath_count
.
metapath_counts
measures the number of metapaths stored in the database between the result node and other node.
If search
and other-node
and both specified, results are sorted by search similarity and results with metapath_count == 0
are returned.
If other-node
is specified but not search
, results are sorted by metapath_count
(descending) and only results with metapath_count > 0
are returned.
GET /v1/nodes/?format=api&offset=45500
http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45525", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45475", "results": [ { "id": 45498, "identifier": "GO:0009712", "identifier_type": "str", "name": "catechol-containing compound metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009712", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45499, "identifier": "DB01511", "identifier_type": "str", "name": "Delorazepam", "properties": { "url": "http://www.drugbank.ca/drugs/DB01511", "inchi": "InChI=1S/C15H10Cl2N2O/c16-9-5-6-13-11(7-9)15(18-8-14(20)19-13)10-3-1-2-4-12(10)17/h1-7H,8H2,(H,19,20)", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=CHIFCDOIPRCHCF-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 45500, "identifier": "GO:2000729", "identifier_type": "str", "name": "positive regulation of mesenchymal cell proliferation involved in ureter development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2000729", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45501, "identifier": "91461", "identifier_type": "int", "name": "PKDCC", "properties": { "url": "http://identifiers.org/ncbigene/91461", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "protein kinase domain containing, cytoplasmic" }, "metanode": "Gene" }, { "id": 45502, "identifier": "219402", "identifier_type": "int", "name": "MTIF3", "properties": { "url": "http://identifiers.org/ncbigene/219402", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "mitochondrial translational initiation factor 3" }, "metanode": "Gene" }, { "id": 45503, "identifier": "C1328519", "identifier_type": "str", "name": "Retinal pigment epithelial tear", "properties": { "url": "http://identifiers.org/umls/C1328519", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45504, "identifier": "C0235437", "identifier_type": "str", "name": "Gravitational oedema", "properties": { "url": "http://identifiers.org/umls/C0235437", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45505, "identifier": "54867", "identifier_type": "int", "name": "TMEM214", "properties": { "url": "http://identifiers.org/ncbigene/54867", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "transmembrane protein 214" }, "metanode": "Gene" }, { "id": 45506, "identifier": "GO:2001030", "identifier_type": "str", "name": "negative regulation of cellular glucuronidation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2001030", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45507, "identifier": "GO:0072162", "identifier_type": "str", "name": "metanephric mesenchymal cell differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0072162", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45508, "identifier": "C0700613", "identifier_type": "str", "name": "Anxiety state", "properties": { "url": "http://identifiers.org/umls/C0700613", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45509, "identifier": "C1456784", "identifier_type": "str", "name": "Paranoia", "properties": { "url": "http://identifiers.org/umls/C1456784", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45510, "identifier": "GO:0070294", "identifier_type": "str", "name": "renal sodium ion absorption", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070294", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45511, "identifier": "7170", "identifier_type": "int", "name": "TPM3", "properties": { "url": "http://identifiers.org/ncbigene/7170", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "tropomyosin 3" }, "metanode": "Gene" }, { "id": 45512, "identifier": "DB01333", "identifier_type": "str", "name": "Cefradine", "properties": { "url": "http://www.drugbank.ca/drugs/DB01333", "inchi": "InChI=1S/C16H19N3O4S/c1-8-7-24-15-11(14(21)19(15)12(8)16(22)23)18-13(20)10(17)9-5-3-2-4-6-9/h2-3,6,10-11,15H,4-5,7,17H2,1H3,(H,18,20)(H,22,23)/t10-,11-,15-/m1/s1", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=RDLPVSKMFDYCOR-UEKVPHQBSA-N" }, "metanode": "Compound" }, { "id": 45513, "identifier": "GO:0014053", "identifier_type": "str", "name": "negative regulation of gamma-aminobutyric acid secretion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0014053", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45514, "identifier": "338917", "identifier_type": "int", "name": "VSX2", "properties": { "url": "http://identifiers.org/ncbigene/338917", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "visual system homeobox 2" }, "metanode": "Gene" }, { "id": 45515, "identifier": "388939", "identifier_type": "int", "name": "C2orf71", "properties": { "url": "http://identifiers.org/ncbigene/388939", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "chromosome 2 open reading frame 71" }, "metanode": "Gene" }, { "id": 45516, "identifier": "GO:0009756", "identifier_type": "str", "name": "carbohydrate mediated signaling", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009756", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45517, "identifier": "2002", "identifier_type": "int", "name": "ELK1", "properties": { "url": "http://identifiers.org/ncbigene/2002", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "ELK1, member of ETS oncogene family" }, "metanode": "Gene" }, { "id": 45518, "identifier": "55565", "identifier_type": "int", "name": "ZNF821", "properties": { "url": "http://identifiers.org/ncbigene/55565", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "zinc finger protein 821" }, "metanode": "Gene" }, { "id": 45519, "identifier": "64184", "identifier_type": "int", "name": "EDDM3B", "properties": { "url": "http://identifiers.org/ncbigene/64184", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "epididymal protein 3B" }, "metanode": "Gene" }, { "id": 45520, "identifier": "317749", "identifier_type": "int", "name": "DHRS4L2", "properties": { "url": "http://identifiers.org/ncbigene/317749", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "dehydrogenase/reductase (SDR family) member 4 like 2" }, "metanode": "Gene" }, { "id": 45521, "identifier": "GO:0023024", "identifier_type": "str", "name": "MHC class I protein complex binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0023024", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 45522, "identifier": "100128437", "identifier_type": "int", "name": "LOC100128437", "properties": { "url": "http://identifiers.org/ncbigene/100128437", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "uncharacterized LOC100128437" }, "metanode": "Gene" } ] }{ "count": 47031, "next": "