Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=45650

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45675",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45625",
    "results": [
        {
            "id": 45648,
            "identifier": "GO:0060556",
            "identifier_type": "str",
            "name": "regulation of vitamin D biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060556",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45649,
            "identifier": "GO:0047522",
            "identifier_type": "str",
            "name": "15-oxoprostaglandin 13-oxidase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0047522",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 45650,
            "identifier": "PC7_1565",
            "identifier_type": "str",
            "name": "Adenosine P1 receptors",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 45651,
            "identifier": "GO:0090313",
            "identifier_type": "str",
            "name": "regulation of protein targeting to membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0090313",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45652,
            "identifier": "GO:0034705",
            "identifier_type": "str",
            "name": "potassium channel complex",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034705",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 45653,
            "identifier": "51228",
            "identifier_type": "int",
            "name": "GLTP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51228",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "glycolipid transfer protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 45654,
            "identifier": "GO:0018685",
            "identifier_type": "str",
            "name": "alkane 1-monooxygenase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0018685",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 45655,
            "identifier": "N0000020024",
            "identifier_type": "str",
            "name": "Sclerosing Activity",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000020024",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Mechanism of Action"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 45656,
            "identifier": "23397",
            "identifier_type": "int",
            "name": "NCAPH",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23397",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "non-SMC condensin I complex, subunit H"
            },
            "metanode": "Gene"
        },
        {
            "id": 45657,
            "identifier": "DB00283",
            "identifier_type": "str",
            "name": "Clemastine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00283",
                "inchi": "InChI=1S/C21H26ClNO/c1-21(17-7-4-3-5-8-17,18-10-12-19(22)13-11-18)24-16-14-20-9-6-15-23(20)2/h3-5,7-8,10-13,20H,6,9,14-16H2,1-2H3/t20-,21-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=YNNUSGIPVFPVBX-NHCUHLMSSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 45658,
            "identifier": "DB00206",
            "identifier_type": "str",
            "name": "Reserpine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00206",
                "inchi": "InChI=1S/C33H40N2O9/c1-38-19-7-8-20-21-9-10-35-16-18-13-27(44-32(36)17-11-25(39-2)30(41-4)26(12-17)40-3)31(42-5)28(33(37)43-6)22(18)15-24(35)29(21)34-23(20)14-19/h7-8,11-12,14,18,22,24,27-28,31,34H,9-10,13,15-16H2,1-6H3/t18-,22+,24-,27-,28+,31+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=QEVHRUUCFGRFIF-MDEJGZGSSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 45659,
            "identifier": "84109",
            "identifier_type": "int",
            "name": "QRFPR",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84109",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "pyroglutamylated RFamide peptide receptor"
            },
            "metanode": "Gene"
        },
        {
            "id": 45660,
            "identifier": "GO:0030176",
            "identifier_type": "str",
            "name": "integral component of endoplasmic reticulum membrane",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0030176",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 45661,
            "identifier": "254228",
            "identifier_type": "int",
            "name": "FAM26E",
            "properties": {
                "url": "http://identifiers.org/ncbigene/254228",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "family with sequence similarity 26, member E"
            },
            "metanode": "Gene"
        },
        {
            "id": 45662,
            "identifier": "GO:1901681",
            "identifier_type": "str",
            "name": "sulfur compound binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1901681",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 45663,
            "identifier": "6240",
            "identifier_type": "int",
            "name": "RRM1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6240",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "ribonucleotide reductase M1"
            },
            "metanode": "Gene"
        },
        {
            "id": 45664,
            "identifier": "64769",
            "identifier_type": "int",
            "name": "MEAF6",
            "properties": {
                "url": "http://identifiers.org/ncbigene/64769",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "MYST/Esa1-associated factor 6"
            },
            "metanode": "Gene"
        },
        {
            "id": 45665,
            "identifier": "C0007855",
            "identifier_type": "str",
            "name": "Cervical polyp",
            "properties": {
                "url": "http://identifiers.org/umls/C0007855",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 45666,
            "identifier": "GO:0007161",
            "identifier_type": "str",
            "name": "calcium-independent cell-matrix adhesion",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007161",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45667,
            "identifier": "79811",
            "identifier_type": "int",
            "name": "SLTM",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79811",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "SAFB-like, transcription modulator"
            },
            "metanode": "Gene"
        },
        {
            "id": 45668,
            "identifier": "100526761",
            "identifier_type": "int",
            "name": "CCDC169-SOHLH2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100526761",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "CCDC169-SOHLH2 readthrough"
            },
            "metanode": "Gene"
        },
        {
            "id": 45669,
            "identifier": "816",
            "identifier_type": "int",
            "name": "CAMK2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/816",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "calcium/calmodulin-dependent protein kinase II beta"
            },
            "metanode": "Gene"
        },
        {
            "id": 45670,
            "identifier": "GO:0006384",
            "identifier_type": "str",
            "name": "transcription initiation from RNA polymerase III promoter",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006384",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45671,
            "identifier": "50854",
            "identifier_type": "int",
            "name": "C6orf48",
            "properties": {
                "url": "http://identifiers.org/ncbigene/50854",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "chromosome 6 open reading frame 48"
            },
            "metanode": "Gene"
        },
        {
            "id": 45672,
            "identifier": "C0151734",
            "identifier_type": "str",
            "name": "Injection site inflammation",
            "properties": {
                "url": "http://identifiers.org/umls/C0151734",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}