Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=45700
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45725", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45675", "results": [ { "id": 45698, "identifier": "1396", "identifier_type": "int", "name": "CRIP1", "properties": { "url": "http://identifiers.org/ncbigene/1396", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "cysteine-rich protein 1 (intestinal)" }, "metanode": "Gene" }, { "id": 45699, "identifier": "9903", "identifier_type": "int", "name": "KLHL21", "properties": { "url": "http://identifiers.org/ncbigene/9903", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "kelch-like family member 21" }, "metanode": "Gene" }, { "id": 45700, "identifier": "PC7_2506", "identifier_type": "str", "name": "Caspase Cascade in Apoptosis", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 45701, "identifier": "GO:1904238", "identifier_type": "str", "name": "pericyte cell differentiation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1904238", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45702, "identifier": "GO:0004569", "identifier_type": "str", "name": "glycoprotein endo-alpha-1,2-mannosidase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004569", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 45703, "identifier": "101060233", "identifier_type": "int", "name": "LOC101060233", "properties": { "url": "http://identifiers.org/ncbigene/101060233", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "medium-wave-sensitive opsin 1" }, "metanode": "Gene" }, { "id": 45704, "identifier": "GO:0032769", "identifier_type": "str", "name": "negative regulation of monooxygenase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032769", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45705, "identifier": "C0342649", "identifier_type": "str", "name": "Vascular calcification", "properties": { "url": "http://identifiers.org/umls/C0342649", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 45706, "identifier": "GO:0030684", "identifier_type": "str", "name": "preribosome", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0030684", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 45707, "identifier": "GO:0042220", "identifier_type": "str", "name": "response to cocaine", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042220", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45708, "identifier": "10841", "identifier_type": "int", "name": "FTCD", "properties": { "url": "http://identifiers.org/ncbigene/10841", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "21", "description": "formimidoyltransferase cyclodeaminase" }, "metanode": "Gene" }, { "id": 45709, "identifier": "GO:0033031", "identifier_type": "str", "name": "positive regulation of neutrophil apoptotic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0033031", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45710, "identifier": "GO:0039534", "identifier_type": "str", "name": "negative regulation of MDA-5 signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0039534", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45711, "identifier": "119392", "identifier_type": "int", "name": "SFR1", "properties": { "url": "http://identifiers.org/ncbigene/119392", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "SWI5-dependent recombination repair 1" }, "metanode": "Gene" }, { "id": 45712, "identifier": "222235", "identifier_type": "int", "name": "FBXL13", "properties": { "url": "http://identifiers.org/ncbigene/222235", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "F-box and leucine-rich repeat protein 13" }, "metanode": "Gene" }, { "id": 45713, "identifier": "GO:0070102", "identifier_type": "str", "name": "interleukin-6-mediated signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070102", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45714, "identifier": "GO:0015846", "identifier_type": "str", "name": "polyamine transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015846", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45715, "identifier": "GO:1902567", "identifier_type": "str", "name": "negative regulation of eosinophil activation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902567", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 45716, "identifier": "4675", "identifier_type": "int", "name": "NAP1L3", "properties": { "url": "http://identifiers.org/ncbigene/4675", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "nucleosome assembly protein 1-like 3" }, "metanode": "Gene" }, { "id": 45717, "identifier": "124044", "identifier_type": "int", "name": "SPATA2L", "properties": { "url": "http://identifiers.org/ncbigene/124044", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "spermatogenesis associated 2-like" }, "metanode": "Gene" }, { "id": 45718, "identifier": "N0000009079", "identifier_type": "str", "name": "Increased Acetylcholine Activity", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000009079", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Physiologic Effect" }, "metanode": "Pharmacologic Class" }, { "id": 45719, "identifier": "7128", "identifier_type": "int", "name": "TNFAIP3", "properties": { "url": "http://identifiers.org/ncbigene/7128", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "tumor necrosis factor, alpha-induced protein 3" }, "metanode": "Gene" }, { "id": 45720, "identifier": "GO:0015382", "identifier_type": "str", "name": "sodium:sulfate symporter activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015382", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 45721, "identifier": "D053591", "identifier_type": "str", "name": "Pain, Referred", "properties": { "url": "http://identifiers.org/mesh/D053591", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 45723, "identifier": "GO:1903991", "identifier_type": "str", "name": "positive regulation of ferrous iron import into cell", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903991", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }