Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=45825

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45850",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45800",
    "results": [
        {
            "id": 45822,
            "identifier": "653689",
            "identifier_type": "int",
            "name": "GSTT2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/653689",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "glutathione S-transferase theta 2B (gene/pseudogene)"
            },
            "metanode": "Gene"
        },
        {
            "id": 45823,
            "identifier": "284417",
            "identifier_type": "int",
            "name": "TMEM150B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284417",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "transmembrane protein 150B"
            },
            "metanode": "Gene"
        },
        {
            "id": 45824,
            "identifier": "GO:0008494",
            "identifier_type": "str",
            "name": "translation activator activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008494",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 45825,
            "identifier": "79903",
            "identifier_type": "int",
            "name": "NAA60",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79903",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "N(alpha)-acetyltransferase 60, NatF catalytic subunit"
            },
            "metanode": "Gene"
        },
        {
            "id": 45826,
            "identifier": "GO:0007179",
            "identifier_type": "str",
            "name": "transforming growth factor beta receptor signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007179",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45827,
            "identifier": "5132",
            "identifier_type": "int",
            "name": "PDC",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5132",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "phosducin"
            },
            "metanode": "Gene"
        },
        {
            "id": 45828,
            "identifier": "55282",
            "identifier_type": "int",
            "name": "LRRC36",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55282",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "leucine rich repeat containing 36"
            },
            "metanode": "Gene"
        },
        {
            "id": 45829,
            "identifier": "GO:0003150",
            "identifier_type": "str",
            "name": "muscular septum morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0003150",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45830,
            "identifier": "90233",
            "identifier_type": "int",
            "name": "ZNF551",
            "properties": {
                "url": "http://identifiers.org/ncbigene/90233",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "zinc finger protein 551"
            },
            "metanode": "Gene"
        },
        {
            "id": 45831,
            "identifier": "GO:0045637",
            "identifier_type": "str",
            "name": "regulation of myeloid cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045637",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45832,
            "identifier": "23099",
            "identifier_type": "int",
            "name": "ZBTB43",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23099",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "zinc finger and BTB domain containing 43"
            },
            "metanode": "Gene"
        },
        {
            "id": 45833,
            "identifier": "DB01764",
            "identifier_type": "str",
            "name": "Dalfopristin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01764",
                "inchi": "InChI=1S/C34H50N4O9S/c1-7-37(8-2)16-17-48(44,45)28-13-15-38-31(28)34(43)47-32(22(3)4)24(6)11-12-29(41)35-14-9-10-23(5)18-25(39)19-26(40)20-30-36-27(21-46-30)33(38)42/h9-12,18,21-22,24-25,28,31-32,39H,7-8,13-17,19-20H2,1-6H3,(H,35,41)/b10-9-,12-11-,23-18-/t24-,25-,28-,31?,32-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=SUYRLXYYZQTJHF-FUODUHIRSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 45834,
            "identifier": "84067",
            "identifier_type": "int",
            "name": "FAM160A2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84067",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "family with sequence similarity 160, member A2"
            },
            "metanode": "Gene"
        },
        {
            "id": 45835,
            "identifier": "GO:0060667",
            "identifier_type": "str",
            "name": "branch elongation involved in salivary gland morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060667",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45836,
            "identifier": "C0001198",
            "identifier_type": "str",
            "name": "Acrodynia",
            "properties": {
                "url": "http://identifiers.org/umls/C0001198",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 45837,
            "identifier": "157638",
            "identifier_type": "int",
            "name": "FAM84B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/157638",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "family with sequence similarity 84, member B"
            },
            "metanode": "Gene"
        },
        {
            "id": 45838,
            "identifier": "64743",
            "identifier_type": "int",
            "name": "WDR13",
            "properties": {
                "url": "http://identifiers.org/ncbigene/64743",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "WD repeat domain 13"
            },
            "metanode": "Gene"
        },
        {
            "id": 45839,
            "identifier": "PC7_8775",
            "identifier_type": "str",
            "name": "WNT5A-dependent internalization of FZD2, FZD5 and ROR2",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 45840,
            "identifier": "C0151689",
            "identifier_type": "str",
            "name": "Hair discoloration",
            "properties": {
                "url": "http://identifiers.org/umls/C0151689",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 45841,
            "identifier": "4158",
            "identifier_type": "int",
            "name": "MC2R",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4158",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "melanocortin 2 receptor (adrenocorticotropic hormone)"
            },
            "metanode": "Gene"
        },
        {
            "id": 45842,
            "identifier": "GO:0035622",
            "identifier_type": "str",
            "name": "intrahepatic bile duct development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0035622",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45843,
            "identifier": "662",
            "identifier_type": "int",
            "name": "BNIP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/662",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "BCL2/adenovirus E1B 19kDa interacting protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 45844,
            "identifier": "9409",
            "identifier_type": "int",
            "name": "PEX16",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9409",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "peroxisomal biogenesis factor 16"
            },
            "metanode": "Gene"
        },
        {
            "id": 45845,
            "identifier": "C0339383",
            "identifier_type": "str",
            "name": "Chorioretinopathy",
            "properties": {
                "url": "http://identifiers.org/umls/C0339383",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 45846,
            "identifier": "C0031046",
            "identifier_type": "str",
            "name": "Pericarditis",
            "properties": {
                "url": "http://identifiers.org/umls/C0031046",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}