Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=45925

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45950",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=45900",
    "results": [
        {
            "id": 45923,
            "identifier": "26135",
            "identifier_type": "int",
            "name": "SERBP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26135",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "SERPINE1 mRNA binding protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 45924,
            "identifier": "55805",
            "identifier_type": "int",
            "name": "LRP2BP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55805",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "LRP2 binding protein"
            },
            "metanode": "Gene"
        },
        {
            "id": 45925,
            "identifier": "DB00468",
            "identifier_type": "str",
            "name": "Quinine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00468",
                "inchi": "InChI=1S/C20H24N2O2/c1-3-13-12-22-9-7-14(13)10-19(22)20(23)16-6-8-21-18-5-4-15(24-2)11-17(16)18/h3-6,8,11,13-14,19-20,23H,1,7,9-10,12H2,2H3/t13-,14-,19-,20+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=LOUPRKONTZGTKE-WZBLMQSHSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 45926,
            "identifier": "343066",
            "identifier_type": "int",
            "name": "AADACL4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/343066",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "arylacetamide deacetylase-like 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 45927,
            "identifier": "C0026836",
            "identifier_type": "str",
            "name": "Muscle relaxation",
            "properties": {
                "url": "http://identifiers.org/umls/C0026836",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 45928,
            "identifier": "487",
            "identifier_type": "int",
            "name": "ATP2A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/487",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "ATPase, Ca++ transporting, cardiac muscle, fast twitch 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 45929,
            "identifier": "50509",
            "identifier_type": "int",
            "name": "COL5A3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/50509",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "collagen, type V, alpha 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 45930,
            "identifier": "127733",
            "identifier_type": "int",
            "name": "UBXN10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/127733",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "UBX domain protein 10"
            },
            "metanode": "Gene"
        },
        {
            "id": 45931,
            "identifier": "GO:0047086",
            "identifier_type": "str",
            "name": "ketosteroid monooxygenase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0047086",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 45932,
            "identifier": "DB08804",
            "identifier_type": "str",
            "name": "Nandrolone decanoate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB08804",
                "inchi": "InChI=1S/C28H44O3/c1-3-4-5-6-7-8-9-10-27(30)31-26-16-15-25-24-13-11-20-19-21(29)12-14-22(20)23(24)17-18-28(25,26)2/h19,22-26H,3-18H2,1-2H3/t22-,23+,24+,25-,26-,28-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JKWKMORAXJQQSR-MOPIKTETSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 45933,
            "identifier": "2940",
            "identifier_type": "int",
            "name": "GSTA3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2940",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "glutathione S-transferase alpha 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 45934,
            "identifier": "GO:0044209",
            "identifier_type": "str",
            "name": "AMP salvage",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0044209",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 45935,
            "identifier": "10020",
            "identifier_type": "int",
            "name": "GNE",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10020",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase"
            },
            "metanode": "Gene"
        },
        {
            "id": 45936,
            "identifier": "80036",
            "identifier_type": "int",
            "name": "TRPM3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80036",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "transient receptor potential cation channel, subfamily M, member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 45937,
            "identifier": "654346",
            "identifier_type": "int",
            "name": "LGALS9C",
            "properties": {
                "url": "http://identifiers.org/ncbigene/654346",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "lectin, galactoside-binding, soluble, 9C"
            },
            "metanode": "Gene"
        },
        {
            "id": 45938,
            "identifier": "7809",
            "identifier_type": "int",
            "name": "BSND",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7809",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "barttin CLCNK-type chloride channel accessory beta subunit"
            },
            "metanode": "Gene"
        },
        {
            "id": 45939,
            "identifier": "26251",
            "identifier_type": "int",
            "name": "KCNG2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26251",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "potassium channel, voltage gated modifier subfamily G, member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 45940,
            "identifier": "5265",
            "identifier_type": "int",
            "name": "SERPINA1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5265",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 45941,
            "identifier": "C0740319",
            "identifier_type": "str",
            "name": "Physical assault",
            "properties": {
                "url": "http://identifiers.org/umls/C0740319",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 45942,
            "identifier": "116143",
            "identifier_type": "int",
            "name": "WDR92",
            "properties": {
                "url": "http://identifiers.org/ncbigene/116143",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "WD repeat domain 92"
            },
            "metanode": "Gene"
        },
        {
            "id": 45943,
            "identifier": "375061",
            "identifier_type": "int",
            "name": "FAM89A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/375061",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "family with sequence similarity 89, member A"
            },
            "metanode": "Gene"
        },
        {
            "id": 45944,
            "identifier": "23360",
            "identifier_type": "int",
            "name": "FNBP4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23360",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "formin binding protein 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 45945,
            "identifier": "400950",
            "identifier_type": "int",
            "name": "C2orf91",
            "properties": {
                "url": "http://identifiers.org/ncbigene/400950",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "chromosome 2 open reading frame 91"
            },
            "metanode": "Gene"
        },
        {
            "id": 45946,
            "identifier": "PC7_7268",
            "identifier_type": "str",
            "name": "SHC1 events in ERBB4 signaling",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 45947,
            "identifier": "GO:1900736",
            "identifier_type": "str",
            "name": "regulation of phospholipase C-activating G-protein coupled receptor signaling pathway",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1900736",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}