Node
Return nodes, sorted by similarity to the search term.
Use search=<str>
to search identifier
for prefix match, and name
for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value>
to set your own similarity
value in the range of (0, 1.0].
Set similarity=1.0
to exclude trigram search.
Filter for select metanodes using metanodes=<str>
, where <str>
is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D
will restrict to Compound and Disease nodes.
Set other-node=<node_id>
to return non-null values for metapath_count
.
metapath_counts
measures the number of metapaths stored in the database between the result node and other node.
If search
and other-node
and both specified, results are sorted by search similarity and results with metapath_count == 0
are returned.
If other-node
is specified but not search
, results are sorted by metapath_count
(descending) and only results with metapath_count > 0
are returned.
GET /v1/nodes/?format=api&offset=46175
http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46200", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46150", "results": [ { "id": 46174, "identifier": "C0857807", "identifier_type": "str", "name": "Accidental ingestion", "properties": { "url": "http://identifiers.org/umls/C0857807", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 46175, "identifier": "337976", "identifier_type": "int", "name": "KRTAP20-2", "properties": { "url": "http://identifiers.org/ncbigene/337976", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "21", "description": "keratin associated protein 20-2" }, "metanode": "Gene" }, { "id": 46176, "identifier": "GO:0042536", "identifier_type": "str", "name": "negative regulation of tumor necrosis factor biosynthetic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042536", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46177, "identifier": "GO:2001268", "identifier_type": "str", "name": "negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2001268", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46178, "identifier": "C0542203", "identifier_type": "str", "name": "Water retention", "properties": { "url": "http://identifiers.org/umls/C0542203", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 46179, "identifier": "GO:1901740", "identifier_type": "str", "name": "negative regulation of myoblast fusion", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1901740", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46180, "identifier": "51099", "identifier_type": "int", "name": "ABHD5", "properties": { "url": "http://identifiers.org/ncbigene/51099", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "abhydrolase domain containing 5" }, "metanode": "Gene" }, { "id": 46181, "identifier": "PC7_2948", "identifier_type": "str", "name": "DNA Damage Reversal", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 46182, "identifier": "GO:0021955", "identifier_type": "str", "name": "central nervous system neuron axonogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0021955", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46183, "identifier": "PC7_6620", "identifier_type": "str", "name": "Propionyl-CoA catabolism", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 46184, "identifier": "390595", "identifier_type": "int", "name": "UBAP1L", "properties": { "url": "http://identifiers.org/ncbigene/390595", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "ubiquitin associated protein 1-like" }, "metanode": "Gene" }, { "id": 46185, "identifier": "3658", "identifier_type": "int", "name": "IREB2", "properties": { "url": "http://identifiers.org/ncbigene/3658", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "iron-responsive element binding protein 2" }, "metanode": "Gene" }, { "id": 46186, "identifier": "GO:0043306", "identifier_type": "str", "name": "positive regulation of mast cell degranulation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043306", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46187, "identifier": "10522", "identifier_type": "int", "name": "DEAF1", "properties": { "url": "http://identifiers.org/ncbigene/10522", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "DEAF1 transcription factor" }, "metanode": "Gene" }, { "id": 46188, "identifier": "DB00850", "identifier_type": "str", "name": "Perphenazine", "properties": { "url": "http://www.drugbank.ca/drugs/DB00850", "inchi": "InChI=1S/C21H26ClN3OS/c22-17-6-7-21-19(16-17)25(18-4-1-2-5-20(18)27-21)9-3-8-23-10-12-24(13-11-23)14-15-26/h1-2,4-7,16,26H,3,8-15H2", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=RGCVKNLCSQQDEP-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 46189, "identifier": "DB01151", "identifier_type": "str", "name": "Desipramine", "properties": { "url": "http://www.drugbank.ca/drugs/DB01151", "inchi": "InChI=1S/C18H22N2/c1-19-13-6-14-20-17-9-4-2-7-15(17)11-12-16-8-3-5-10-18(16)20/h2-5,7-10,19H,6,11-14H2,1H3", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=HCYAFALTSJYZDH-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 46190, "identifier": "2880", "identifier_type": "int", "name": "GPX5", "properties": { "url": "http://identifiers.org/ncbigene/2880", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "glutathione peroxidase 5" }, "metanode": "Gene" }, { "id": 46191, "identifier": "113763", "identifier_type": "int", "name": "ZBED6CL", "properties": { "url": "http://identifiers.org/ncbigene/113763", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "ZBED6 C-terminal like" }, "metanode": "Gene" }, { "id": 46192, "identifier": "155038", "identifier_type": "int", "name": "GIMAP8", "properties": { "url": "http://identifiers.org/ncbigene/155038", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "GTPase, IMAP family member 8" }, "metanode": "Gene" }, { "id": 46193, "identifier": "4356", "identifier_type": "int", "name": "MPP3", "properties": { "url": "http://identifiers.org/ncbigene/4356", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)" }, "metanode": "Gene" }, { "id": 46194, "identifier": "84934", "identifier_type": "int", "name": "RITA1", "properties": { "url": "http://identifiers.org/ncbigene/84934", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "RBPJ interacting and tubulin associated 1" }, "metanode": "Gene" }, { "id": 46195, "identifier": "C0405479", "identifier_type": "str", "name": "Nipple disorder", "properties": { "url": "http://identifiers.org/umls/C0405479", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 46196, "identifier": "GO:0072163", "identifier_type": "str", "name": "mesonephric epithelium development", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0072163", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46197, "identifier": "PC7_4994", "identifier_type": "str", "name": "Lissencephaly gene (LIS1) in neuronal migration and development", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 46198, "identifier": "GO:0043394", "identifier_type": "str", "name": "proteoglycan binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043394", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" } ] }{ "count": 47031, "next": "