Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=46325
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46350", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46300", "results": [ { "id": 46324, "identifier": "56980", "identifier_type": "int", "name": "PRDM10", "properties": { "url": "http://identifiers.org/ncbigene/56980", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "PR domain containing 10" }, "metanode": "Gene" }, { "id": 46325, "identifier": "PC7_5969", "identifier_type": "str", "name": "Noncanonical Wnt signaling pathway", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 46326, "identifier": "GO:0048499", "identifier_type": "str", "name": "synaptic vesicle membrane organization", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048499", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46327, "identifier": "GO:0015985", "identifier_type": "str", "name": "energy coupled proton transport, down electrochemical gradient", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0015985", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46328, "identifier": "GO:1903706", "identifier_type": "str", "name": "regulation of hemopoiesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1903706", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46329, "identifier": "PC7_5890", "identifier_type": "str", "name": "Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 46330, "identifier": "GO:1902525", "identifier_type": "str", "name": "regulation of protein monoubiquitination", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1902525", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46331, "identifier": "PC7_7477", "identifier_type": "str", "name": "Signaling by Robo receptor", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 46332, "identifier": "64100", "identifier_type": "int", "name": "ELSPBP1", "properties": { "url": "http://identifiers.org/ncbigene/64100", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "epididymal sperm binding protein 1" }, "metanode": "Gene" }, { "id": 46333, "identifier": "GO:0071442", "identifier_type": "str", "name": "positive regulation of histone H3-K14 acetylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071442", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46334, "identifier": "GO:0048478", "identifier_type": "str", "name": "replication fork protection", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048478", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46335, "identifier": "19", "identifier_type": "int", "name": "ABCA1", "properties": { "url": "http://identifiers.org/ncbigene/19", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "ATP-binding cassette, sub-family A (ABC1), member 1" }, "metanode": "Gene" }, { "id": 46336, "identifier": "GO:2001274", "identifier_type": "str", "name": "negative regulation of glucose import in response to insulin stimulus", "properties": { "url": "http://purl.obolibrary.org/obo/GO_2001274", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46337, "identifier": "105378081", "identifier_type": "int", "name": "LOC105378081", "properties": { "url": "http://identifiers.org/ncbigene/105378081", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "uncharacterized LOC105378081" }, "metanode": "Gene" }, { "id": 46338, "identifier": "26749", "identifier_type": "int", "name": "GAGE2E", "properties": { "url": "http://identifiers.org/ncbigene/26749", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "X", "description": "G antigen 2E" }, "metanode": "Gene" }, { "id": 46339, "identifier": "11235", "identifier_type": "int", "name": "PDCD10", "properties": { "url": "http://identifiers.org/ncbigene/11235", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "programmed cell death 10" }, "metanode": "Gene" }, { "id": 46340, "identifier": "GO:0009191", "identifier_type": "str", "name": "ribonucleoside diphosphate catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0009191", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46341, "identifier": "GO:0050851", "identifier_type": "str", "name": "antigen receptor-mediated signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0050851", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46342, "identifier": "29074", "identifier_type": "int", "name": "MRPL18", "properties": { "url": "http://identifiers.org/ncbigene/29074", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "mitochondrial ribosomal protein L18" }, "metanode": "Gene" }, { "id": 46343, "identifier": "5069", "identifier_type": "int", "name": "PAPPA", "properties": { "url": "http://identifiers.org/ncbigene/5069", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "pregnancy-associated plasma protein A, pappalysin 1" }, "metanode": "Gene" }, { "id": 46344, "identifier": "54963", "identifier_type": "int", "name": "UCKL1", "properties": { "url": "http://identifiers.org/ncbigene/54963", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "uridine-cytidine kinase 1-like 1" }, "metanode": "Gene" }, { "id": 46345, "identifier": "GO:0042045", "identifier_type": "str", "name": "epithelial fluid transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042045", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46346, "identifier": "C0262662", "identifier_type": "str", "name": "Ventricular bigeminy", "properties": { "url": "http://identifiers.org/umls/C0262662", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 46347, "identifier": "C0085652", "identifier_type": "str", "name": "Pyoderma gangrenosum", "properties": { "url": "http://identifiers.org/umls/C0085652", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 46348, "identifier": "23036", "identifier_type": "int", "name": "ZNF292", "properties": { "url": "http://identifiers.org/ncbigene/23036", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "zinc finger protein 292" }, "metanode": "Gene" } ] }