Node
Return nodes, sorted by similarity to the search term.
Use search=<str>
to search identifier
for prefix match, and name
for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value>
to set your own similarity
value in the range of (0, 1.0].
Set similarity=1.0
to exclude trigram search.
Filter for select metanodes using metanodes=<str>
, where <str>
is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D
will restrict to Compound and Disease nodes.
Set other-node=<node_id>
to return non-null values for metapath_count
.
metapath_counts
measures the number of metapaths stored in the database between the result node and other node.
If search
and other-node
and both specified, results are sorted by search similarity and results with metapath_count == 0
are returned.
If other-node
is specified but not search
, results are sorted by metapath_count
(descending) and only results with metapath_count > 0
are returned.
GET /v1/nodes/?format=api&offset=46550
http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46575", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46525", "results": [ { "id": 46549, "identifier": "GO:0005859", "identifier_type": "str", "name": "muscle myosin complex", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0005859", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 46550, "identifier": "2882", "identifier_type": "int", "name": "GPX7", "properties": { "url": "http://identifiers.org/ncbigene/2882", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "glutathione peroxidase 7" }, "metanode": "Gene" }, { "id": 46551, "identifier": "C0238463", "identifier_type": "str", "name": "Papillary thyroid cancer", "properties": { "url": "http://identifiers.org/umls/C0238463", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 46552, "identifier": "C0549293", "identifier_type": "str", "name": "Nasal soreness", "properties": { "url": "http://identifiers.org/umls/C0549293", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 46553, "identifier": "GO:0032736", "identifier_type": "str", "name": "positive regulation of interleukin-13 production", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032736", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46554, "identifier": "392636", "identifier_type": "int", "name": "AGMO", "properties": { "url": "http://identifiers.org/ncbigene/392636", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "alkylglycerol monooxygenase" }, "metanode": "Gene" }, { "id": 46555, "identifier": "C0268948", "identifier_type": "str", "name": "Scrotal ulcer", "properties": { "url": "http://identifiers.org/umls/C0268948", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 46556, "identifier": "GO:0016155", "identifier_type": "str", "name": "formyltetrahydrofolate dehydrogenase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0016155", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 46557, "identifier": "160428", "identifier_type": "int", "name": "ALDH1L2", "properties": { "url": "http://identifiers.org/ncbigene/160428", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "aldehyde dehydrogenase 1 family, member L2" }, "metanode": "Gene" }, { "id": 46558, "identifier": "GO:0061072", "identifier_type": "str", "name": "iris morphogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0061072", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46559, "identifier": "51277", "identifier_type": "int", "name": "DNAJC27", "properties": { "url": "http://identifiers.org/ncbigene/51277", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "DnaJ (Hsp40) homolog, subfamily C, member 27" }, "metanode": "Gene" }, { "id": 46560, "identifier": "101928601", "identifier_type": "int", "name": "MEI4", "properties": { "url": "http://identifiers.org/ncbigene/101928601", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "meiosis-specific 4 homolog (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 46561, "identifier": "GO:1904896", "identifier_type": "str", "name": "ESCRT complex disassembly", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1904896", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46562, "identifier": "197135", "identifier_type": "int", "name": "PATL2", "properties": { "url": "http://identifiers.org/ncbigene/197135", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "protein associated with topoisomerase II homolog 2 (yeast)" }, "metanode": "Gene" }, { "id": 46563, "identifier": "23190", "identifier_type": "int", "name": "UBXN4", "properties": { "url": "http://identifiers.org/ncbigene/23190", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "UBX domain protein 4" }, "metanode": "Gene" }, { "id": 46564, "identifier": "7804", "identifier_type": "int", "name": "LRP8", "properties": { "url": "http://identifiers.org/ncbigene/7804", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "low density lipoprotein receptor-related protein 8, apolipoprotein e receptor" }, "metanode": "Gene" }, { "id": 46565, "identifier": "GO:0042816", "identifier_type": "str", "name": "vitamin B6 metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042816", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46566, "identifier": "GO:0046135", "identifier_type": "str", "name": "pyrimidine nucleoside catabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0046135", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46567, "identifier": "GO:0034513", "identifier_type": "str", "name": "box H/ACA snoRNA binding", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0034513", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 46568, "identifier": "GO:0045292", "identifier_type": "str", "name": "mRNA cis splicing, via spliceosome", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045292", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46569, "identifier": "GO:0032743", "identifier_type": "str", "name": "positive regulation of interleukin-2 production", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032743", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46570, "identifier": "GO:0014043", "identifier_type": "str", "name": "negative regulation of neuron maturation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0014043", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 46571, "identifier": "26984", "identifier_type": "int", "name": "SEC22A", "properties": { "url": "http://identifiers.org/ncbigene/26984", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "SEC22 vesicle trafficking protein homolog A (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 46572, "identifier": "6830", "identifier_type": "int", "name": "SUPT6H", "properties": { "url": "http://identifiers.org/ncbigene/6830", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "suppressor of Ty 6 homolog (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 46573, "identifier": "GO:0048016", "identifier_type": "str", "name": "inositol phosphate-mediated signaling", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0048016", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" } ] }{ "count": 47031, "next": "