Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=46575

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46600",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46550",
    "results": [
        {
            "id": 46574,
            "identifier": "DB00636",
            "identifier_type": "str",
            "name": "Clofibrate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00636",
                "inchi": "InChI=1S/C12H15ClO3/c1-4-15-11(14)12(2,3)16-10-7-5-9(13)6-8-10/h5-8H,4H2,1-3H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=KNHUKKLJHYUCFP-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 46575,
            "identifier": "C0858618",
            "identifier_type": "str",
            "name": "Dyschromatopsia",
            "properties": {
                "url": "http://identifiers.org/umls/C0858618",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 46576,
            "identifier": "865",
            "identifier_type": "int",
            "name": "CBFB",
            "properties": {
                "url": "http://identifiers.org/ncbigene/865",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "core-binding factor, beta subunit"
            },
            "metanode": "Gene"
        },
        {
            "id": 46577,
            "identifier": "9372",
            "identifier_type": "int",
            "name": "ZFYVE9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9372",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "zinc finger, FYVE domain containing 9"
            },
            "metanode": "Gene"
        },
        {
            "id": 46578,
            "identifier": "220136",
            "identifier_type": "int",
            "name": "CFAP53",
            "properties": {
                "url": "http://identifiers.org/ncbigene/220136",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "cilia and flagella associated protein 53"
            },
            "metanode": "Gene"
        },
        {
            "id": 46579,
            "identifier": "389199",
            "identifier_type": "int",
            "name": "LOC389199",
            "properties": {
                "url": "http://identifiers.org/ncbigene/389199",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "uncharacterized LOC389199"
            },
            "metanode": "Gene"
        },
        {
            "id": 46580,
            "identifier": "DB00991",
            "identifier_type": "str",
            "name": "Oxaprozin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00991",
                "inchi": "InChI=1S/C18H15NO3/c20-16(21)12-11-15-19-17(13-7-3-1-4-8-13)18(22-15)14-9-5-2-6-10-14/h1-10H,11-12H2,(H,20,21)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=OFPXSFXSNFPTHF-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 46581,
            "identifier": "3206",
            "identifier_type": "int",
            "name": "HOXA10",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3206",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "homeobox A10"
            },
            "metanode": "Gene"
        },
        {
            "id": 46582,
            "identifier": "GO:1902564",
            "identifier_type": "str",
            "name": "negative regulation of neutrophil activation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902564",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46583,
            "identifier": "DB06267",
            "identifier_type": "str",
            "name": "Udenafil",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06267",
                "inchi": "InChI=1S/C25H36N6O4S/c1-5-8-20-22-23(31(4)29-20)25(32)28-24(27-22)19-16-18(10-11-21(19)35-15-6-2)36(33,34)26-13-12-17-9-7-14-30(17)3/h10-11,16-17,26H,5-9,12-15H2,1-4H3,(H,27,28,32)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=IYFNEFQTYQPVOC-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 46584,
            "identifier": "83640",
            "identifier_type": "int",
            "name": "FAM103A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/83640",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "family with sequence similarity 103, member A1"
            },
            "metanode": "Gene"
        },
        {
            "id": 46585,
            "identifier": "342574",
            "identifier_type": "int",
            "name": "KRT27",
            "properties": {
                "url": "http://identifiers.org/ncbigene/342574",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "keratin 27, type I"
            },
            "metanode": "Gene"
        },
        {
            "id": 46586,
            "identifier": "C2945558",
            "identifier_type": "str",
            "name": "Vulvovaginitis trichomonal",
            "properties": {
                "url": "http://identifiers.org/umls/C2945558",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 46587,
            "identifier": "29920",
            "identifier_type": "int",
            "name": "PYCR2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/29920",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "pyrroline-5-carboxylate reductase family, member 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 46588,
            "identifier": "10326",
            "identifier_type": "int",
            "name": "SIRPB1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10326",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "signal-regulatory protein beta 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 46589,
            "identifier": "51585",
            "identifier_type": "int",
            "name": "PCF11",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51585",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "PCF11 cleavage and polyadenylation factor subunit"
            },
            "metanode": "Gene"
        },
        {
            "id": 46590,
            "identifier": "GO:0098642",
            "identifier_type": "str",
            "name": "network-forming collagen trimer",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0098642",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Cellular Component"
        },
        {
            "id": 46591,
            "identifier": "441476",
            "identifier_type": "int",
            "name": "C9orf173",
            "properties": {
                "url": "http://identifiers.org/ncbigene/441476",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "chromosome 9 open reading frame 173"
            },
            "metanode": "Gene"
        },
        {
            "id": 46592,
            "identifier": "DB01002",
            "identifier_type": "str",
            "name": "Levobupivacaine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01002",
                "inchi": "InChI=1S/C18H28N2O/c1-4-5-12-20-13-7-6-11-16(20)18(21)19-17-14(2)9-8-10-15(17)3/h8-10,16H,4-7,11-13H2,1-3H3,(H,19,21)/t16-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=LEBVLXFERQHONN-INIZCTEOSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 46593,
            "identifier": "GO:0043922",
            "identifier_type": "str",
            "name": "negative regulation by host of viral transcription",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0043922",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46594,
            "identifier": "GO:0061179",
            "identifier_type": "str",
            "name": "negative regulation of insulin secretion involved in cellular response to glucose stimulus",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061179",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46595,
            "identifier": "N0000000174",
            "identifier_type": "str",
            "name": "Opioid Agonists",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000000174",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Mechanism of Action"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 46596,
            "identifier": "GO:0008948",
            "identifier_type": "str",
            "name": "oxaloacetate decarboxylase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0008948",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 46597,
            "identifier": "GO:0019198",
            "identifier_type": "str",
            "name": "transmembrane receptor protein phosphatase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0019198",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 46598,
            "identifier": "C1096250",
            "identifier_type": "str",
            "name": "Gastrointestinal discomfort",
            "properties": {
                "url": "http://identifiers.org/umls/C1096250",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        }
    ]
}