Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=46675

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46700",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46650",
    "results": [
        {
            "id": 46674,
            "identifier": "C0149512",
            "identifier_type": "str",
            "name": "Acute sinusitis",
            "properties": {
                "url": "http://identifiers.org/umls/C0149512",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 46675,
            "identifier": "GO:0015197",
            "identifier_type": "str",
            "name": "peptide transporter activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015197",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 46676,
            "identifier": "GO:0015807",
            "identifier_type": "str",
            "name": "L-amino acid transport",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0015807",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46677,
            "identifier": "27036",
            "identifier_type": "int",
            "name": "SIGLEC7",
            "properties": {
                "url": "http://identifiers.org/ncbigene/27036",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "sialic acid binding Ig-like lectin 7"
            },
            "metanode": "Gene"
        },
        {
            "id": 46678,
            "identifier": "57576",
            "identifier_type": "int",
            "name": "KIF17",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57576",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "kinesin family member 17"
            },
            "metanode": "Gene"
        },
        {
            "id": 46679,
            "identifier": "80255",
            "identifier_type": "int",
            "name": "SLC35F5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/80255",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "solute carrier family 35, member F5"
            },
            "metanode": "Gene"
        },
        {
            "id": 46680,
            "identifier": "N0000185504",
            "identifier_type": "str",
            "name": "Cytochrome P450 2C9 Inhibitors",
            "properties": {
                "url": "http://purl.bioontology.org/ontology/NDFRT/N0000185504",
                "source": "FDA via DrugCentral",
                "license": "CC BY 4.0",
                "class_type": "Mechanism of Action"
            },
            "metanode": "Pharmacologic Class"
        },
        {
            "id": 46681,
            "identifier": "390442",
            "identifier_type": "int",
            "name": "OR11H4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/390442",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "olfactory receptor, family 11, subfamily H, member 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 46682,
            "identifier": "GO:0086043",
            "identifier_type": "str",
            "name": "bundle of His cell action potential",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0086043",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46683,
            "identifier": "GO:0007264",
            "identifier_type": "str",
            "name": "small GTPase mediated signal transduction",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007264",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46684,
            "identifier": "GO:0001042",
            "identifier_type": "str",
            "name": "RNA polymerase I core binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0001042",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 46685,
            "identifier": "GO:0070506",
            "identifier_type": "str",
            "name": "high-density lipoprotein particle receptor activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0070506",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 46686,
            "identifier": "DB01167",
            "identifier_type": "str",
            "name": "Itraconazole",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01167",
                "inchi": "InChI=1S/C35H38Cl2N8O4/c1-3-25(2)45-34(46)44(24-40-45)29-7-5-27(6-8-29)41-14-16-42(17-15-41)28-9-11-30(12-10-28)47-19-31-20-48-35(49-31,21-43-23-38-22-39-43)32-13-4-26(36)18-33(32)37/h4-13,18,22-25,31H,3,14-17,19-21H2,1-2H3/t25?,31-,35-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=VHVPQPYKVGDNFY-ZPGVKDDISA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 46687,
            "identifier": "DB01187",
            "identifier_type": "str",
            "name": "Iophendylate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01187",
                "inchi": "InChI=1S/C19H29IO2/c1-3-22-19(21)15-9-7-5-4-6-8-12-16(2)17-13-10-11-14-18(17)20/h10-11,13-14,16H,3-9,12,15H2,1-2H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=IWRUDYQZPTVTPA-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 46688,
            "identifier": "147945",
            "identifier_type": "int",
            "name": "NLRP4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/147945",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "NLR family, pyrin domain containing 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 46689,
            "identifier": "GO:0045717",
            "identifier_type": "str",
            "name": "negative regulation of fatty acid biosynthetic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045717",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46690,
            "identifier": "C0876980",
            "identifier_type": "str",
            "name": "Headache aggravated",
            "properties": {
                "url": "http://identifiers.org/umls/C0876980",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 46691,
            "identifier": "GO:0007566",
            "identifier_type": "str",
            "name": "embryo implantation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007566",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46692,
            "identifier": "GO:0004127",
            "identifier_type": "str",
            "name": "cytidylate kinase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0004127",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 46693,
            "identifier": "WP236_r80209",
            "identifier_type": "str",
            "name": "Adipogenesis",
            "properties": {
                "url": "http://www.wikipathways.org/instance/WP236_r80209",
                "source": "WikiPathways",
                "license": "CC BY 3.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 46694,
            "identifier": "56204",
            "identifier_type": "int",
            "name": "FAM214A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56204",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "family with sequence similarity 214, member A"
            },
            "metanode": "Gene"
        },
        {
            "id": 46695,
            "identifier": "79865",
            "identifier_type": "int",
            "name": "TREML2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79865",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "triggering receptor expressed on myeloid cells-like 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 46696,
            "identifier": "1014",
            "identifier_type": "int",
            "name": "CDH16",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1014",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "cadherin 16, KSP-cadherin"
            },
            "metanode": "Gene"
        },
        {
            "id": 46697,
            "identifier": "C0265072",
            "identifier_type": "str",
            "name": "Inferior vena cava syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C0265072",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 46698,
            "identifier": "GO:0045597",
            "identifier_type": "str",
            "name": "positive regulation of cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045597",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}