Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=46875

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46900",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=46850",
    "results": [
        {
            "id": 46875,
            "identifier": "2733",
            "identifier_type": "int",
            "name": "GLE1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2733",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "GLE1 RNA export mediator"
            },
            "metanode": "Gene"
        },
        {
            "id": 46876,
            "identifier": "DB01116",
            "identifier_type": "str",
            "name": "Trimethaphan",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01116",
                "inchi": "InChI=1S/C22H25N2OS/c25-22-23(14-17-8-3-1-4-9-17)19-16-26-13-7-12-20(26)21(19)24(22)15-18-10-5-2-6-11-18/h1-6,8-11,19-21H,7,12-16H2/q+1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CHQOEHPMXSHGCL-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 46877,
            "identifier": "100129280",
            "identifier_type": "int",
            "name": "LOC100129280",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100129280",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "uncharacterized LOC100129280"
            },
            "metanode": "Gene"
        },
        {
            "id": 46878,
            "identifier": "C0234979",
            "identifier_type": "str",
            "name": "Dysdiadochokinesis",
            "properties": {
                "url": "http://identifiers.org/umls/C0234979",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 46879,
            "identifier": "147339",
            "identifier_type": "int",
            "name": "C18orf25",
            "properties": {
                "url": "http://identifiers.org/ncbigene/147339",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "chromosome 18 open reading frame 25"
            },
            "metanode": "Gene"
        },
        {
            "id": 46880,
            "identifier": "5314",
            "identifier_type": "int",
            "name": "PKHD1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5314",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "polycystic kidney and hepatic disease 1 (autosomal recessive)"
            },
            "metanode": "Gene"
        },
        {
            "id": 46881,
            "identifier": "55208",
            "identifier_type": "int",
            "name": "DCUN1D2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55208",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "DCN1, defective in cullin neddylation 1, domain containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 46882,
            "identifier": "PC7_3991",
            "identifier_type": "str",
            "name": "G alpha (12/13) signalling events",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 46883,
            "identifier": "GO:1903509",
            "identifier_type": "str",
            "name": "liposaccharide metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1903509",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46884,
            "identifier": "C0221785",
            "identifier_type": "str",
            "name": "Ache wrists",
            "properties": {
                "url": "http://identifiers.org/umls/C0221785",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 46885,
            "identifier": "23281",
            "identifier_type": "int",
            "name": "MTUS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23281",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "microtubule associated tumor suppressor candidate 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 46886,
            "identifier": "DB01348",
            "identifier_type": "str",
            "name": "Spirapril",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01348",
                "inchi": "InChI=1S/C22H30N2O5S2/c1-3-29-21(28)17(10-9-16-7-5-4-6-8-16)23-15(2)19(25)24-14-22(30-11-12-31-22)13-18(24)20(26)27/h4-8,15,17-18,23H,3,9-14H2,1-2H3,(H,26,27)/t15-,17-,18-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=HRWCVUIFMSZDJS-SZMVWBNQSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 46887,
            "identifier": "7783",
            "identifier_type": "int",
            "name": "ZP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7783",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "zona pellucida glycoprotein 2 (sperm receptor)"
            },
            "metanode": "Gene"
        },
        {
            "id": 46888,
            "identifier": "GO:0051262",
            "identifier_type": "str",
            "name": "protein tetramerization",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051262",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46889,
            "identifier": "C0154933",
            "identifier_type": "str",
            "name": "Iris adhesions",
            "properties": {
                "url": "http://identifiers.org/umls/C0154933",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 46890,
            "identifier": "PC7_7392",
            "identifier_type": "str",
            "name": "Scavenging by Class A Receptors",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 46891,
            "identifier": "100130976",
            "identifier_type": "int",
            "name": "LOC100130976",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100130976",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "uncharacterized LOC100130976"
            },
            "metanode": "Gene"
        },
        {
            "id": 46892,
            "identifier": "GO:0006639",
            "identifier_type": "str",
            "name": "acylglycerol metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006639",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46893,
            "identifier": "GO:0006474",
            "identifier_type": "str",
            "name": "N-terminal protein amino acid acetylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006474",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46894,
            "identifier": "DB06697",
            "identifier_type": "str",
            "name": "Artemether",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB06697",
                "inchi": "InChI=1S/C16H26O5/c1-9-5-6-12-10(2)13(17-4)18-14-16(12)11(9)7-8-15(3,19-14)20-21-16/h9-14H,5-8H2,1-4H3/t9-,10-,11+,12+,13+,14-,15-,16-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=SXYIRMFQILZOAM-HVNFFKDJSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 46895,
            "identifier": "79711",
            "identifier_type": "int",
            "name": "IPO4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79711",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "importin 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 46896,
            "identifier": "8289",
            "identifier_type": "int",
            "name": "ARID1A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8289",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "AT rich interactive domain 1A (SWI-like)"
            },
            "metanode": "Gene"
        },
        {
            "id": 46897,
            "identifier": "GO:0032613",
            "identifier_type": "str",
            "name": "interleukin-10 production",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0032613",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 46898,
            "identifier": "844",
            "identifier_type": "int",
            "name": "CASQ1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/844",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "calsequestrin 1 (fast-twitch, skeletal muscle)"
            },
            "metanode": "Gene"
        },
        {
            "id": 46899,
            "identifier": "9351",
            "identifier_type": "int",
            "name": "SLC9A3R2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/9351",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "16",
                "description": "solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2"
            },
            "metanode": "Gene"
        }
    ]
}