Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=4750

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=4775",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=4725",
    "results": [
        {
            "id": 4739,
            "identifier": "7074",
            "identifier_type": "int",
            "name": "TIAM1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/7074",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "21",
                "description": "T-cell lymphoma invasion and metastasis 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 4740,
            "identifier": "146909",
            "identifier_type": "int",
            "name": "KIF18B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/146909",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "kinesin family member 18B"
            },
            "metanode": "Gene"
        },
        {
            "id": 4741,
            "identifier": "57096",
            "identifier_type": "int",
            "name": "RPGRIP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/57096",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "retinitis pigmentosa GTPase regulator interacting protein 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 4742,
            "identifier": "26047",
            "identifier_type": "int",
            "name": "CNTNAP2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26047",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "contactin associated protein-like 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 4743,
            "identifier": "GO:0005342",
            "identifier_type": "str",
            "name": "organic acid transmembrane transporter activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0005342",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 4744,
            "identifier": "GO:0021769",
            "identifier_type": "str",
            "name": "orbitofrontal cortex development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0021769",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 4745,
            "identifier": "1906",
            "identifier_type": "int",
            "name": "EDN1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1906",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "endothelin 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 4746,
            "identifier": "64216",
            "identifier_type": "int",
            "name": "TFB2M",
            "properties": {
                "url": "http://identifiers.org/ncbigene/64216",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "transcription factor B2, mitochondrial"
            },
            "metanode": "Gene"
        },
        {
            "id": 4747,
            "identifier": "DB01183",
            "identifier_type": "str",
            "name": "Naloxone",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01183",
                "inchi": "InChI=1S/C19H21NO4/c1-2-8-20-9-7-18-15-11-3-4-12(21)16(15)24-17(18)13(22)5-6-19(18,23)14(20)10-11/h2-4,14,17,21,23H,1,5-10H2/t14-,17+,18+,19-/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=UZHSEJADLWPNLE-GRGSLBFTSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 4748,
            "identifier": "GO:0002225",
            "identifier_type": "str",
            "name": "positive regulation of antimicrobial peptide production",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0002225",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 4749,
            "identifier": "79002",
            "identifier_type": "int",
            "name": "C19orf43",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79002",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "chromosome 19 open reading frame 43"
            },
            "metanode": "Gene"
        },
        {
            "id": 4750,
            "identifier": "C0020538",
            "identifier_type": "str",
            "name": "Hypertension",
            "properties": {
                "url": "http://identifiers.org/umls/C0020538",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 4751,
            "identifier": "C0524909",
            "identifier_type": "str",
            "name": "Chronic hepatitis B",
            "properties": {
                "url": "http://identifiers.org/umls/C0524909",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 4752,
            "identifier": "151",
            "identifier_type": "int",
            "name": "ADRA2B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/151",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "adrenoceptor alpha 2B"
            },
            "metanode": "Gene"
        },
        {
            "id": 4753,
            "identifier": "8898",
            "identifier_type": "int",
            "name": "MTMR2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8898",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "myotubularin related protein 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 4754,
            "identifier": "C0014869",
            "identifier_type": "str",
            "name": "Reflux esophagitis",
            "properties": {
                "url": "http://identifiers.org/umls/C0014869",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 4755,
            "identifier": "389541",
            "identifier_type": "int",
            "name": "LAMTOR4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/389541",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "late endosomal/lysosomal adaptor, MAPK and MTOR activator 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 4756,
            "identifier": "284486",
            "identifier_type": "int",
            "name": "THEM5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/284486",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "thioesterase superfamily member 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 4757,
            "identifier": "GO:0034483",
            "identifier_type": "str",
            "name": "heparan sulfate sulfotransferase activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0034483",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 4758,
            "identifier": "C0149778",
            "identifier_type": "str",
            "name": "Soft tissue infection",
            "properties": {
                "url": "http://identifiers.org/umls/C0149778",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 4759,
            "identifier": "DB00699",
            "identifier_type": "str",
            "name": "Nicergoline",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00699",
                "inchi": "InChI=1S/C24H26BrN3O3/c1-27-13-17-8-21-24(30-3,19-5-4-6-20(27)22(17)19)9-15(12-28(21)2)14-31-23(29)16-7-18(25)11-26-10-16/h4-7,10-11,13,15,21H,8-9,12,14H2,1-3H3/t15-,21-,24+/m1/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=YSEXMKHXIOCEJA-FVFQAYNVSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 4760,
            "identifier": "GO:0006269",
            "identifier_type": "str",
            "name": "DNA replication, synthesis of RNA primer",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006269",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 4761,
            "identifier": "79956",
            "identifier_type": "int",
            "name": "ERMP1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/79956",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "endoplasmic reticulum metallopeptidase 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 4762,
            "identifier": "114336",
            "identifier_type": "int",
            "name": "CGB2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/114336",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "chorionic gonadotropin, beta polypeptide 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 4763,
            "identifier": "GO:0072156",
            "identifier_type": "str",
            "name": "distal tubule morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0072156",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}