Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=50
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=75", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=25", "results": [ { "id": 49, "identifier": "4708", "identifier_type": "int", "name": "NDUFB2", "properties": { "url": "http://identifiers.org/ncbigene/4708", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa" }, "metanode": "Gene" }, { "id": 50, "identifier": "7161", "identifier_type": "int", "name": "TP73", "properties": { "url": "http://identifiers.org/ncbigene/7161", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "tumor protein p73" }, "metanode": "Gene" }, { "id": 51, "identifier": "283229", "identifier_type": "int", "name": "CRACR2B", "properties": { "url": "http://identifiers.org/ncbigene/283229", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "calcium release activated channel regulator 2B" }, "metanode": "Gene" }, { "id": 52, "identifier": "192666", "identifier_type": "int", "name": "KRT24", "properties": { "url": "http://identifiers.org/ncbigene/192666", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "keratin 24, type I" }, "metanode": "Gene" }, { "id": 53, "identifier": "GO:0090086", "identifier_type": "str", "name": "negative regulation of protein deubiquitination", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0090086", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 54, "identifier": "C0346156", "identifier_type": "str", "name": "Benign breast neoplasm", "properties": { "url": "http://identifiers.org/umls/C0346156", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 55, "identifier": "731996", "identifier_type": "int", "name": "LOC731996", "properties": { "url": "http://identifiers.org/ncbigene/731996", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "13", "description": "uncharacterized LOC731996" }, "metanode": "Gene" }, { "id": 56, "identifier": "5771", "identifier_type": "int", "name": "PTPN2", "properties": { "url": "http://identifiers.org/ncbigene/5771", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "18", "description": "protein tyrosine phosphatase, non-receptor type 2" }, "metanode": "Gene" }, { "id": 57, "identifier": "25886", "identifier_type": "int", "name": "POC1A", "properties": { "url": "http://identifiers.org/ncbigene/25886", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "POC1 centriolar protein A" }, "metanode": "Gene" }, { "id": 58, "identifier": "64063", "identifier_type": "int", "name": "PRSS22", "properties": { "url": "http://identifiers.org/ncbigene/64063", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "protease, serine, 22" }, "metanode": "Gene" }, { "id": 59, "identifier": "79089", "identifier_type": "int", "name": "TMUB2", "properties": { "url": "http://identifiers.org/ncbigene/79089", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "transmembrane and ubiquitin-like domain containing 2" }, "metanode": "Gene" }, { "id": 60, "identifier": "238", "identifier_type": "int", "name": "ALK", "properties": { "url": "http://identifiers.org/ncbigene/238", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "anaplastic lymphoma receptor tyrosine kinase" }, "metanode": "Gene" }, { "id": 61, "identifier": "8729", "identifier_type": "int", "name": "GBF1", "properties": { "url": "http://identifiers.org/ncbigene/8729", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "golgi brefeldin A resistant guanine nucleotide exchange factor 1" }, "metanode": "Gene" }, { "id": 62, "identifier": "GO:0019210", "identifier_type": "str", "name": "kinase inhibitor activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0019210", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 63, "identifier": "GO:0004008", "identifier_type": "str", "name": "copper-exporting ATPase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004008", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 64, "identifier": "GO:1901727", "identifier_type": "str", "name": "positive regulation of histone deacetylase activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1901727", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 65, "identifier": "C0282548", "identifier_type": "str", "name": "Leukostasis", "properties": { "url": "http://identifiers.org/umls/C0282548", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 66, "identifier": "80740", "identifier_type": "int", "name": "LY6G6C", "properties": { "url": "http://identifiers.org/ncbigene/80740", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "lymphocyte antigen 6 complex, locus G6C" }, "metanode": "Gene" }, { "id": 67, "identifier": "2563", "identifier_type": "int", "name": "GABRD", "properties": { "url": "http://identifiers.org/ncbigene/2563", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "gamma-aminobutyric acid (GABA) A receptor, delta" }, "metanode": "Gene" }, { "id": 68, "identifier": "11198", "identifier_type": "int", "name": "SUPT16H", "properties": { "url": "http://identifiers.org/ncbigene/11198", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "14", "description": "suppressor of Ty 16 homolog (S. cerevisiae)" }, "metanode": "Gene" }, { "id": 69, "identifier": "114780", "identifier_type": "int", "name": "PKD1L2", "properties": { "url": "http://identifiers.org/ncbigene/114780", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "polycystic kidney disease 1-like 2 (gene/pseudogene)" }, "metanode": "Gene" }, { "id": 70, "identifier": "PC7_3826", "identifier_type": "str", "name": "FGFR3 ligand binding and activation", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 71, "identifier": "GO:0097475", "identifier_type": "str", "name": "motor neuron migration", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0097475", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 72, "identifier": "160365", "identifier_type": "int", "name": "CLECL1", "properties": { "url": "http://identifiers.org/ncbigene/160365", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "C-type lectin-like 1" }, "metanode": "Gene" }, { "id": 73, "identifier": "5016", "identifier_type": "int", "name": "OVGP1", "properties": { "url": "http://identifiers.org/ncbigene/5016", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "oviductal glycoprotein 1, 120kDa" }, "metanode": "Gene" } ] }