Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=525
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=550", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=500", "results": [ { "id": 524, "identifier": "GO:0043589", "identifier_type": "str", "name": "skin morphogenesis", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0043589", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 525, "identifier": "C0268919", "identifier_type": "str", "name": "Scrotal disorder", "properties": { "url": "http://identifiers.org/umls/C0268919", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 526, "identifier": "GO:0010862", "identifier_type": "str", "name": "positive regulation of pathway-restricted SMAD protein phosphorylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0010862", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 527, "identifier": "105369275", "identifier_type": "int", "name": "LOC105369275", "properties": { "url": "http://identifiers.org/ncbigene/105369275", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "COPII coat assembly protein SEC16-like" }, "metanode": "Gene" }, { "id": 528, "identifier": "PC7_11143", "identifier_type": "str", "name": "cGMP effects", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 529, "identifier": "C0948782", "identifier_type": "str", "name": "Uterine cramps", "properties": { "url": "http://identifiers.org/umls/C0948782", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 530, "identifier": "GO:0042383", "identifier_type": "str", "name": "sarcolemma", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042383", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Cellular Component" }, { "id": 531, "identifier": "658", "identifier_type": "int", "name": "BMPR1B", "properties": { "url": "http://identifiers.org/ncbigene/658", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "4", "description": "bone morphogenetic protein receptor, type IB" }, "metanode": "Gene" }, { "id": 532, "identifier": "9421", "identifier_type": "int", "name": "HAND1", "properties": { "url": "http://identifiers.org/ncbigene/9421", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "5", "description": "heart and neural crest derivatives expressed 1" }, "metanode": "Gene" }, { "id": 533, "identifier": "50808", "identifier_type": "int", "name": "AK3", "properties": { "url": "http://identifiers.org/ncbigene/50808", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "9", "description": "adenylate kinase 3" }, "metanode": "Gene" }, { "id": 534, "identifier": "C1697943", "identifier_type": "str", "name": "Epidermal growth factor receptor decreased", "properties": { "url": "http://identifiers.org/umls/C1697943", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 535, "identifier": "GO:0090140", "identifier_type": "str", "name": "regulation of mitochondrial fission", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0090140", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 536, "identifier": "GO:0004958", "identifier_type": "str", "name": "prostaglandin F receptor activity", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0004958", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Molecular Function" }, { "id": 537, "identifier": "3127", "identifier_type": "int", "name": "HLA-DRB5", "properties": { "url": "http://identifiers.org/ncbigene/3127", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "major histocompatibility complex, class II, DR beta 5" }, "metanode": "Gene" }, { "id": 538, "identifier": "GO:0032507", "identifier_type": "str", "name": "maintenance of protein location in cell", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032507", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 539, "identifier": "5708", "identifier_type": "int", "name": "PSMD2", "properties": { "url": "http://identifiers.org/ncbigene/5708", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "proteasome (prosome, macropain) 26S subunit, non-ATPase, 2" }, "metanode": "Gene" }, { "id": 540, "identifier": "51506", "identifier_type": "int", "name": "UFC1", "properties": { "url": "http://identifiers.org/ncbigene/51506", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "ubiquitin-fold modifier conjugating enzyme 1" }, "metanode": "Gene" }, { "id": 541, "identifier": "80153", "identifier_type": "int", "name": "EDC3", "properties": { "url": "http://identifiers.org/ncbigene/80153", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "enhancer of mRNA decapping 3" }, "metanode": "Gene" }, { "id": 542, "identifier": "8161", "identifier_type": "int", "name": "COIL", "properties": { "url": "http://identifiers.org/ncbigene/8161", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "coilin" }, "metanode": "Gene" }, { "id": 543, "identifier": "54103", "identifier_type": "int", "name": "GSAP", "properties": { "url": "http://identifiers.org/ncbigene/54103", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "gamma-secretase activating protein" }, "metanode": "Gene" }, { "id": 544, "identifier": "D000419", "identifier_type": "str", "name": "Albuminuria", "properties": { "url": "http://identifiers.org/mesh/D000419", "source": "MeSH", "license": "CC0 1.0" }, "metanode": "Symptom" }, { "id": 545, "identifier": "105374250", "identifier_type": "int", "name": "LOC105374250", "properties": { "url": "http://identifiers.org/ncbigene/105374250", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "uncharacterized LOC105374250" }, "metanode": "Gene" }, { "id": 546, "identifier": "UBERON:0001716", "identifier_type": "str", "name": "secondary palate", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0001716", "bto_id": "BTO:0001779", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D010159" }, "metanode": "Anatomy" }, { "id": 547, "identifier": "100509072", "identifier_type": "int", "name": "LOC100509072", "properties": { "url": "http://identifiers.org/ncbigene/100509072", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "uncharacterized LOC100509072" }, "metanode": "Gene" }, { "id": 548, "identifier": "6406", "identifier_type": "int", "name": "SEMG1", "properties": { "url": "http://identifiers.org/ncbigene/6406", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "20", "description": "semenogelin I" }, "metanode": "Gene" } ] }