Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=6850

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=6875",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=6825",
    "results": [
        {
            "id": 6841,
            "identifier": "105377639",
            "identifier_type": "int",
            "name": "LOC105377639",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105377639",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "adhesive plaque matrix protein-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 6842,
            "identifier": "C0014038",
            "identifier_type": "str",
            "name": "Encephalitis",
            "properties": {
                "url": "http://identifiers.org/umls/C0014038",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 6843,
            "identifier": "26035",
            "identifier_type": "int",
            "name": "GLCE",
            "properties": {
                "url": "http://identifiers.org/ncbigene/26035",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "glucuronic acid epimerase"
            },
            "metanode": "Gene"
        },
        {
            "id": 6949,
            "identifier": "170960",
            "identifier_type": "int",
            "name": "ZNF721",
            "properties": {
                "url": "http://identifiers.org/ncbigene/170960",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "zinc finger protein 721"
            },
            "metanode": "Gene"
        },
        {
            "id": 6844,
            "identifier": "2030",
            "identifier_type": "int",
            "name": "SLC29A1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2030",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "solute carrier family 29 (equilibrative nucleoside transporter), member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 6845,
            "identifier": "C0948240",
            "identifier_type": "str",
            "name": "Thyroxine free decreased",
            "properties": {
                "url": "http://identifiers.org/umls/C0948240",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 6846,
            "identifier": "GO:0019049",
            "identifier_type": "str",
            "name": "evasion or tolerance of host defenses by virus",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0019049",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 6847,
            "identifier": "23547",
            "identifier_type": "int",
            "name": "LILRA4",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23547",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4"
            },
            "metanode": "Gene"
        },
        {
            "id": 6848,
            "identifier": "UBERON:0001980",
            "identifier_type": "str",
            "name": "arteriole",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/UBERON_0001980",
                "bto_id": "BTO:0001997",
                "source": "Uberon",
                "license": "CC BY 3.0",
                "mesh_id": "D001160"
            },
            "metanode": "Anatomy"
        },
        {
            "id": 6849,
            "identifier": "259",
            "identifier_type": "int",
            "name": "AMBP",
            "properties": {
                "url": "http://identifiers.org/ncbigene/259",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "alpha-1-microglobulin/bikunin precursor"
            },
            "metanode": "Gene"
        },
        {
            "id": 6850,
            "identifier": "8894",
            "identifier_type": "int",
            "name": "EIF2S2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8894",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "20",
                "description": "eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 6851,
            "identifier": "C0042594",
            "identifier_type": "str",
            "name": "Vestibular disorder",
            "properties": {
                "url": "http://identifiers.org/umls/C0042594",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 6852,
            "identifier": "DB00741",
            "identifier_type": "str",
            "name": "Hydrocortisone",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00741",
                "inchi": "InChI=1S/C21H30O5/c1-19-7-5-13(23)9-12(19)3-4-14-15-6-8-21(26,17(25)11-22)20(15,2)10-16(24)18(14)19/h9,14-16,18,22,24,26H,3-8,10-11H2,1-2H3/t14-,15-,16-,18+,19-,20-,21-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=JYGXADMDTFJGBT-VWUMJDOOSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 6853,
            "identifier": "C1456865",
            "identifier_type": "str",
            "name": "Calculus ureteric",
            "properties": {
                "url": "http://identifiers.org/umls/C1456865",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 6854,
            "identifier": "GO:0045682",
            "identifier_type": "str",
            "name": "regulation of epidermis development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0045682",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 6855,
            "identifier": "GO:2000617",
            "identifier_type": "str",
            "name": "positive regulation of histone H3-K9 acetylation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000617",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 6856,
            "identifier": "81579",
            "identifier_type": "int",
            "name": "PLA2G12A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/81579",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "phospholipase A2, group XIIA"
            },
            "metanode": "Gene"
        },
        {
            "id": 6857,
            "identifier": "389649",
            "identifier_type": "int",
            "name": "C8orf86",
            "properties": {
                "url": "http://identifiers.org/ncbigene/389649",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "chromosome 8 open reading frame 86"
            },
            "metanode": "Gene"
        },
        {
            "id": 6858,
            "identifier": "256691",
            "identifier_type": "int",
            "name": "MAMDC2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/256691",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "MAM domain containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 6859,
            "identifier": "2712",
            "identifier_type": "int",
            "name": "GK2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2712",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "glycerol kinase 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 6860,
            "identifier": "C0852922",
            "identifier_type": "str",
            "name": "Crohns disease aggravated",
            "properties": {
                "url": "http://identifiers.org/umls/C0852922",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 6861,
            "identifier": "DB00091",
            "identifier_type": "str",
            "name": "Cyclosporine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00091",
                "inchi": "InChI=1/C62H111N11O12/c1-25-27-28-40(15)52(75)51-56(79)65-43(26-2)58(81)67(18)33-48(74)68(19)44(29-34(3)4)55(78)66-49(38(11)12)61(84)69(20)45(30-35(5)6)54(77)63-41(16)53(76)64-42(17)57(80)70(21)46(31-36(7)8)59(82)71(22)47(32-37(9)10)60(83)72(23)50(39(13)14)62(85)73(51)24/h25,27,34-47,49-52,75H,26,28-33H2,1-24H3,(H,63,77)(H,64,76)(H,65,79)(H,66,78)/b27-25+",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=PMATZTZNYRCHOR-IMVLJIQENA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 6862,
            "identifier": "PC7_6396",
            "identifier_type": "str",
            "name": "Peptide ligand-binding receptors",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 6863,
            "identifier": "344148",
            "identifier_type": "int",
            "name": "NCKAP5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/344148",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "NCK-associated protein 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 6864,
            "identifier": "GO:0003407",
            "identifier_type": "str",
            "name": "neural retina development",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0003407",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        }
    ]
}