Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=7350
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=7375", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=7325", "results": [ { "id": 7341, "identifier": "GO:0042044", "identifier_type": "str", "name": "fluid transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0042044", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 7342, "identifier": "23046", "identifier_type": "int", "name": "KIF21B", "properties": { "url": "http://identifiers.org/ncbigene/23046", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "kinesin family member 21B" }, "metanode": "Gene" }, { "id": 7343, "identifier": "161514", "identifier_type": "int", "name": "TBC1D21", "properties": { "url": "http://identifiers.org/ncbigene/161514", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "15", "description": "TBC1 domain family, member 21" }, "metanode": "Gene" }, { "id": 7344, "identifier": "C0745103", "identifier_type": "str", "name": "Type IIa hyperlipidaemia", "properties": { "url": "http://identifiers.org/umls/C0745103", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 7345, "identifier": "C1167654", "identifier_type": "str", "name": "Acute prerenal failure", "properties": { "url": "http://identifiers.org/umls/C1167654", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 7346, "identifier": "C0239276", "identifier_type": "str", "name": "Eosinophiluria", "properties": { "url": "http://identifiers.org/umls/C0239276", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 7347, "identifier": "344807", "identifier_type": "int", "name": "CD200R1L", "properties": { "url": "http://identifiers.org/ncbigene/344807", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "3", "description": "CD200 receptor 1-like" }, "metanode": "Gene" }, { "id": 7348, "identifier": "C0235378", "identifier_type": "str", "name": "Hepatotoxicity", "properties": { "url": "http://identifiers.org/umls/C0235378", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 7349, "identifier": "391475", "identifier_type": "int", "name": "DYTN", "properties": { "url": "http://identifiers.org/ncbigene/391475", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "dystrotelin" }, "metanode": "Gene" }, { "id": 7350, "identifier": "PC7_1855", "identifier_type": "str", "name": "Aurora A signaling", "properties": { "source": "PID via Pathway Commons", "license": "CC0 1.0" }, "metanode": "Pathway" }, { "id": 7351, "identifier": "4538", "identifier_type": "int", "name": "ND4", "properties": { "url": "http://identifiers.org/ncbigene/4538", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "MT", "description": "NADH dehydrogenase, subunit 4 (complex I)" }, "metanode": "Gene" }, { "id": 7352, "identifier": "GO:0045338", "identifier_type": "str", "name": "farnesyl diphosphate metabolic process", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0045338", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 7353, "identifier": "GO:0070098", "identifier_type": "str", "name": "chemokine-mediated signaling pathway", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0070098", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 7354, "identifier": "UBERON:0001783", "identifier_type": "str", "name": "optic disc", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0001783", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D009898" }, "metanode": "Anatomy" }, { "id": 7355, "identifier": "7135", "identifier_type": "int", "name": "TNNI1", "properties": { "url": "http://identifiers.org/ncbigene/7135", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "troponin I type 1 (skeletal, slow)" }, "metanode": "Gene" }, { "id": 7356, "identifier": "57157", "identifier_type": "int", "name": "PHTF2", "properties": { "url": "http://identifiers.org/ncbigene/57157", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "putative homeodomain transcription factor 2" }, "metanode": "Gene" }, { "id": 7357, "identifier": "GO:0071594", "identifier_type": "str", "name": "thymocyte aggregation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0071594", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 7358, "identifier": "148281", "identifier_type": "int", "name": "SYT6", "properties": { "url": "http://identifiers.org/ncbigene/148281", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "synaptotagmin VI" }, "metanode": "Gene" }, { "id": 7359, "identifier": "25972", "identifier_type": "int", "name": "UNC50", "properties": { "url": "http://identifiers.org/ncbigene/25972", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "unc-50 homolog (C. elegans)" }, "metanode": "Gene" }, { "id": 7360, "identifier": "27097", "identifier_type": "int", "name": "TAF5L", "properties": { "url": "http://identifiers.org/ncbigene/27097", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa" }, "metanode": "Gene" }, { "id": 7361, "identifier": "89910", "identifier_type": "int", "name": "UBE3B", "properties": { "url": "http://identifiers.org/ncbigene/89910", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "12", "description": "ubiquitin protein ligase E3B" }, "metanode": "Gene" }, { "id": 7362, "identifier": "PC7_6669", "identifier_type": "str", "name": "Pyruvate metabolism", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 7363, "identifier": "C1167686", "identifier_type": "str", "name": "Nail toxicity", "properties": { "url": "http://identifiers.org/umls/C1167686", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 7364, "identifier": "GO:1901536", "identifier_type": "str", "name": "negative regulation of DNA demethylation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_1901536", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 7365, "identifier": "196", "identifier_type": "int", "name": "AHR", "properties": { "url": "http://identifiers.org/ncbigene/196", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "aryl hydrocarbon receptor" }, "metanode": "Gene" } ] }