Node
Return nodes, sorted by similarity to the search term.
Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3);
Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0].
Set similarity=1.0 to exclude trigram search.
Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations.
For example, metanodes=C,D will restrict to Compound and Disease nodes.
Set other-node=<node_id> to return non-null values for metapath_count.
metapath_counts measures the number of metapaths stored in the database between the result node and other node.
If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned.
If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.
GET /v1/nodes/?format=api&offset=7500
{ "count": 47031, "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=7525", "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=7475", "results": [ { "id": 7491, "identifier": "79894", "identifier_type": "int", "name": "ZNF672", "properties": { "url": "http://identifiers.org/ncbigene/79894", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "zinc finger protein 672" }, "metanode": "Gene" }, { "id": 7492, "identifier": "392188", "identifier_type": "int", "name": "USP17L8", "properties": { "url": "http://identifiers.org/ncbigene/392188", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "8", "description": "ubiquitin specific peptidase 17-like family member 8" }, "metanode": "Gene" }, { "id": 7493, "identifier": "55273", "identifier_type": "int", "name": "TMEM100", "properties": { "url": "http://identifiers.org/ncbigene/55273", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "17", "description": "transmembrane protein 100" }, "metanode": "Gene" }, { "id": 7494, "identifier": "23090", "identifier_type": "int", "name": "ZNF423", "properties": { "url": "http://identifiers.org/ncbigene/23090", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "16", "description": "zinc finger protein 423" }, "metanode": "Gene" }, { "id": 7495, "identifier": "7576", "identifier_type": "int", "name": "ZNF28", "properties": { "url": "http://identifiers.org/ncbigene/7576", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "19", "description": "zinc finger protein 28" }, "metanode": "Gene" }, { "id": 7496, "identifier": "9582", "identifier_type": "int", "name": "APOBEC3B", "properties": { "url": "http://identifiers.org/ncbigene/9582", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "22", "description": "apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B" }, "metanode": "Gene" }, { "id": 7497, "identifier": "GO:0051133", "identifier_type": "str", "name": "regulation of NK T cell activation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0051133", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 7498, "identifier": "92565", "identifier_type": "int", "name": "FANK1", "properties": { "url": "http://identifiers.org/ncbigene/92565", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "fibronectin type III and ankyrin repeat domains 1" }, "metanode": "Gene" }, { "id": 7499, "identifier": "105369270", "identifier_type": "int", "name": "LOC105369270", "properties": { "url": "http://identifiers.org/ncbigene/105369270", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "10", "description": "uncharacterized LOC105369270" }, "metanode": "Gene" }, { "id": 7500, "identifier": "GO:0007094", "identifier_type": "str", "name": "mitotic spindle assembly checkpoint", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0007094", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 7501, "identifier": "DB01588", "identifier_type": "str", "name": "Prazepam", "properties": { "url": "http://www.drugbank.ca/drugs/DB01588", "inchi": "InChI=1S/C19H17ClN2O/c20-15-8-9-17-16(10-15)19(14-4-2-1-3-5-14)21-11-18(23)22(17)12-13-6-7-13/h1-5,8-10,13H,6-7,11-12H2", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=MWQCHHACWWAQLJ-UHFFFAOYSA-N" }, "metanode": "Compound" }, { "id": 7502, "identifier": "55971", "identifier_type": "int", "name": "BAIAP2L1", "properties": { "url": "http://identifiers.org/ncbigene/55971", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "7", "description": "BAI1-associated protein 2-like 1" }, "metanode": "Gene" }, { "id": 7503, "identifier": "GO:0031639", "identifier_type": "str", "name": "plasminogen activation", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0031639", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 7504, "identifier": "PC7_2095", "identifier_type": "str", "name": "Binding and Uptake of Ligands by Scavenger Receptors", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 7505, "identifier": "494513", "identifier_type": "int", "name": "DFNB59", "properties": { "url": "http://identifiers.org/ncbigene/494513", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "2", "description": "deafness, autosomal recessive 59" }, "metanode": "Gene" }, { "id": 7506, "identifier": "653", "identifier_type": "int", "name": "BMP5", "properties": { "url": "http://identifiers.org/ncbigene/653", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "bone morphogenetic protein 5" }, "metanode": "Gene" }, { "id": 7507, "identifier": "C0034186", "identifier_type": "str", "name": "Pyelonephritis", "properties": { "url": "http://identifiers.org/umls/C0034186", "source": "UMLS via SIDER 4.1", "license": "CC BY-NC-SA 4.0" }, "metanode": "Side Effect" }, { "id": 7508, "identifier": "PC7_1863", "identifier_type": "str", "name": "Axon guidance", "properties": { "source": "Reactome via Pathway Commons", "license": "CC BY 4.0" }, "metanode": "Pathway" }, { "id": 7509, "identifier": "643680", "identifier_type": "int", "name": "MS4A4E", "properties": { "url": "http://identifiers.org/ncbigene/643680", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "11", "description": "membrane-spanning 4-domains, subfamily A, member 4E" }, "metanode": "Gene" }, { "id": 7510, "identifier": "N0000184148", "identifier_type": "str", "name": "Smoothened Receptor Antagonists", "properties": { "url": "http://purl.bioontology.org/ontology/NDFRT/N0000184148", "source": "FDA via DrugCentral", "license": "CC BY 4.0", "class_type": "Mechanism of Action" }, "metanode": "Pharmacologic Class" }, { "id": 7511, "identifier": "3106", "identifier_type": "int", "name": "HLA-B", "properties": { "url": "http://identifiers.org/ncbigene/3106", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "6", "description": "major histocompatibility complex, class I, B" }, "metanode": "Gene" }, { "id": 7512, "identifier": "GO:0032365", "identifier_type": "str", "name": "intracellular lipid transport", "properties": { "url": "http://purl.obolibrary.org/obo/GO_0032365", "source": "Gene Ontology", "license": "CC BY 4.0" }, "metanode": "Biological Process" }, { "id": 7513, "identifier": "57795", "identifier_type": "int", "name": "BRINP2", "properties": { "url": "http://identifiers.org/ncbigene/57795", "source": "Entrez Gene", "license": "CC0 1.0", "chromosome": "1", "description": "bone morphogenetic protein/retinoic acid inducible neural-specific 2" }, "metanode": "Gene" }, { "id": 7514, "identifier": "UBERON:0001786", "identifier_type": "str", "name": "fovea centralis", "properties": { "url": "http://purl.obolibrary.org/obo/UBERON_0001786", "source": "Uberon", "license": "CC BY 3.0", "mesh_id": "D005584" }, "metanode": "Anatomy" }, { "id": 7515, "identifier": "DB00904", "identifier_type": "str", "name": "Ondansetron", "properties": { "url": "http://www.drugbank.ca/drugs/DB00904", "inchi": "InChI=1S/C18H19N3O/c1-12-19-9-10-21(12)11-13-7-8-16-17(18(13)22)14-5-3-4-6-15(14)20(16)2/h3-6,9-10,13H,7-8,11H2,1-2H3", "source": "DrugBank", "license": "CC BY-NC 4.0", "inchikey": "InChIKey=FELGMEQIXOGIFQ-UHFFFAOYSA-N" }, "metanode": "Compound" } ] }